Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2506 |
Symbol | |
ID | 4253077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2978806 |
End bp | 2979771 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638119141 |
Product | cytochrome C family protein |
Protein accession | YP_734634 |
Protein GI | 113970841 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01905] doubled CXXCH domain [TIGR03508] decaheme c-type cytochrome, DmsE family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.365224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00105775 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACATGG ATATTGGGTT AAAGTTCAAA AGCATAACTC AGGTTATGCT TGTTGTGATG TTATCGATAC TCAGCCTTTC AACGTTAGCG ACACCTTGGG ATGACAAGCC GCCCGAGGAG GTCGTCGCGA CTTTGGACAA AAAATTTGCC GAAGGTAAGT ACTCGGCCAA AGGGGCTGAC ACTTGCCTGA TGTGCCATAA GAAAAGTGCC ACTGTGATGG CCATTTTTGA TGGTGTACAT GGTAATCCTA ATGTCAACGA TTCCCCCATG GCCGACTTAC AGTGTGAGGC TTGCCACGGC CCACTCGGTA ATCATAACAA GGGTGGCAAA GAGCCGATGA TCACCTTCGG CCAGAATTCC CCCGTTCCCG CGCAAAAACA AAACAGTGTC TGCATGAGTT GCCATAACGA CGATCAACGC ATCGCGTGGA AAGGCAATCA CCATGACAAT GCAGATATCC CCTGTAGTAG CTGCCACCAA GTACACGTAG CAAAAGACCC TATCAGCGAC AAAGCCAACG AAGTGGCGAT TTGTACCCAA TGCCATACCC AGCAAAAAGC GGATATGCAC AAACGCTCAT CCCATCCATT GCAATGGCAA CAAATGGTCT GTAGCGATTG CCACAATCCC CATGGCAGTT TAAATGATGC CAGTCTGAAG CAAATGAGCG TCAACGAAAA CTGTTACAGC TGCCACGCCG AAAAACGCGG CCCCAAATTG TGGGAACATG CGCCAGTCAC CGATAATTGC GCGAACTGCC ATAACCCCCA CGGCAGCGTC AACGAATCCA TGCTTATCAG CAAACCGCCA CAGTTATGCC AACAGTGCCA CGCCTCCGAT GGCCACAGCA GTAATGCTTA CTTTGGTAAT CAAACCAATG CCTTCACCTC GGGTAATTCC TGTATGAATT GCCATGGACA AGTGCATGGT TCAAACCATC CATCCGGCAA GTTGCTCCAG AGATAA
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Protein sequence | MNMDIGLKFK SITQVMLVVM LSILSLSTLA TPWDDKPPEE VVATLDKKFA EGKYSAKGAD TCLMCHKKSA TVMAIFDGVH GNPNVNDSPM ADLQCEACHG PLGNHNKGGK EPMITFGQNS PVPAQKQNSV CMSCHNDDQR IAWKGNHHDN ADIPCSSCHQ VHVAKDPISD KANEVAICTQ CHTQQKADMH KRSSHPLQWQ QMVCSDCHNP HGSLNDASLK QMSVNENCYS CHAEKRGPKL WEHAPVTDNC ANCHNPHGSV NESMLISKPP QLCQQCHASD GHSSNAYFGN QTNAFTSGNS CMNCHGQVHG SNHPSGKLLQ R
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