| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2385 |
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| Symbol | |
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| ID | 4252956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2844445 |
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| End bp | 2845452 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119017 |
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| Product | patatin |
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| Protein accession | YP_734513 |
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| Protein GI | 113970720 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4667] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000835704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCGA TTAGCCATTT ATCTTCTGCC TCTCAATCTG TTACCGCGCC GAAAGTGGCG
TTAATTGCAG AAGGTGGCGG CCAGCGTGGC ATTTTTACCG CAGGCGTACT CGATGCTTGG
CTTGAGGCGG AGTTCGACCC CTTCGACTTA TTGATTGGCA CCTCCGCAGG CTCGCAAAAC
TTGACCAGCT TTTTAGCCAG ACAAAAGGGT TACGCCAAAA AACTAATCCG GGGGCTAACG
CGCCATAAAC GTTTCTATCA ACTAGGGCGC GGTCTGATTG GTGCGAATGT TATCGATCTC
GACTGGTATT TCGAGCAGAC TCAGCGTGGC AGCTTTAAGC TGGATTTAGC CGCGGCGAGT
CAATCCCTCA ATGGGCGAGA ACTCCTTATC ACCACCACGA GAGTTAGCGA TCGCCAAGGG
TATTTCTTGA GTCCAACCAG TCATGAGCAC TGGCGTGAGT TACTTAAAGC CTCTAGTGCA
TTGCCTTTTT TATATAAACA GGGAGTGAGG TTAACGCCTT GGCTAGGGAT TGAATCTGCC
AATCATAGCG ATGCGACACT CGAACCCGAG CAAGACTTTT ACCTCGATGG CGGTTTAGCG
GCGCCGCTGC CCGTGCGTGA GGCGTATAAA CGGGGTGCGC GCAAAATTGT GGTAGTGAGG
ACGGTCAATG CAGACTTTCA AGCTCAATCG GCTTGGGTAC ATAAGCTTAA ATCGTGGATC
TGTGTTTCTG GTTTTTGCCC TAAGACCATT GATTACTTAG TGCAGCATGA AGAGGCCTAT
CAGGCCGAGT TAGATTTTAT TGCTAATCCT CCCGATGATG TCGAAATTGT GCAGATTTTT
GCGAAGGCGC CATTGCAGAG CAAGTTGTTA GGTAGCACAG ATGCGGATTT ACGGATTGAT
TACCAGCAAG GGATAAAGGC GGGGAAGGCG TTTCTTGCAA CGTCCTCTCG GCAAATTGCC
AAGGTTAAAG ATGTGACACC CGTTTCACCA CTGGCAATAT CGGCATAG
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| Protein sequence | MPPISHLSSA SQSVTAPKVA LIAEGGGQRG IFTAGVLDAW LEAEFDPFDL LIGTSAGSQN
LTSFLARQKG YAKKLIRGLT RHKRFYQLGR GLIGANVIDL DWYFEQTQRG SFKLDLAAAS
QSLNGRELLI TTTRVSDRQG YFLSPTSHEH WRELLKASSA LPFLYKQGVR LTPWLGIESA
NHSDATLEPE QDFYLDGGLA APLPVREAYK RGARKIVVVR TVNADFQAQS AWVHKLKSWI
CVSGFCPKTI DYLVQHEEAY QAELDFIANP PDDVEIVQIF AKAPLQSKLL GSTDADLRID
YQQGIKAGKA FLATSSRQIA KVKDVTPVSP LAISA
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