| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2369 |
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| Symbol | |
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| ID | 4252940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2826052 |
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| End bp | 2827074 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119001 |
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| Product | TolA family protein |
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| Protein accession | YP_734497 |
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| Protein GI | 113970704 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | [TIGR02794] TolA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000264795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.177811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCGGATA ATTCAAATGT TGCATTACCT CTGTCAATTT CAGCAGGTAT TCATATTGGC
GTGATAATTA TTCTGGCCAT TGGCATAGAT TTCACCCATA AACCTGAACC TGTGCAACAA
GTTAGCGCCC CTGCAGTAAA AGCTGTTATG GTTGATCAGC AAAAAGTGGC TAATCAAGTT
GAAAAGCTTA AGCAGGAAAA GCGCGATGCT GAGCGCCGCG AACGTGAGCG CCAAGCCGAA
CTTGAACGCA AAGCACAGGA AGCAAAGCAA GCCCGTGAGC GTGAACAAGC ACAGTTGAAG
AAACTGGCGG AAGAACGTAA GCAGCAGGAA ATTGAGACCC AAAAGGCCAA TGATGCCGCG
AAAGCCGCGC AGGTGAAGCA ACAACAGGAA AAGGAAAAAG CGCAGAAAGC TGAAGCCGAC
CGCAAGCAAA AGGAGCAAGA ACGTAAACTT GCTGAAGATG CAGCTCAAAA AGCGGCGGAA
AAACGCAAAG TAGAAGAGGC CGCAGCCGCG AAAGCCGAGG CAGACCGTAA GCAGAAGGAA
GCCGAAGCCA AGGCGAAAGC AGAGGCAGAA GCTAAGGCCA AAGCGGAGGC AAAAGCCAAG
GCAGATGCTG AAGCGAAAGC AAAGGCCGAA GCTAAGGCAA AAGCGGATGC AGAAGCTAAA
GCGCGTGCTC AGCAAGAGCA GGAAATGGCC GATGCGTTAG CCGCCGAACA GGCTGCGTTA
TCACAAACCA TGAATAAGCA AATGCAGACG GAAGTGGGTA AATACACCGC GATGATTAAA
TCGACGATTC AACGCAACCT AGTGGTTGAC GAGTCGATGC GTGGTAAAAC CTGTACTGTT
TCTGTGCGTT TAGCCAATGA TGGTTTTGTG ATCAGCAGTC AGACACAGGG TGGCGATCCT
AACGTGTGCC GTGCAACTAA AGCGGCGATC TTAAAAGCGG GCAAGTTACC AGTGTCTCCG
GACCCTGCGG TTTATAACTT GATGAAAGAA ATTAACTTAA TCGTTGAACC AACGTTTAAT
TAA
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| Protein sequence | MADNSNVALP LSISAGIHIG VIIILAIGID FTHKPEPVQQ VSAPAVKAVM VDQQKVANQV
EKLKQEKRDA ERRERERQAE LERKAQEAKQ AREREQAQLK KLAEERKQQE IETQKANDAA
KAAQVKQQQE KEKAQKAEAD RKQKEQERKL AEDAAQKAAE KRKVEEAAAA KAEADRKQKE
AEAKAKAEAE AKAKAEAKAK ADAEAKAKAE AKAKADAEAK ARAQQEQEMA DALAAEQAAL
SQTMNKQMQT EVGKYTAMIK STIQRNLVVD ESMRGKTCTV SVRLANDGFV ISSQTQGGDP
NVCRATKAAI LKAGKLPVSP DPAVYNLMKE INLIVEPTFN
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