Gene Shewmr4_2365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2365 
Symbol 
ID4252936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2820859 
End bp2822022 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content48% 
IMG OID638118990 
Producthypothetical protein 
Protein accessionYP_734493 
Protein GI113970700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000963211 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0778781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAG CAAAACTTAG CTTGCTTTAC TCTGCAACCT TATTGGCATT TATGGGCTCT 
GCCAATGCGG CTTCTTTAAA AAATACTGAC GTTGAATTTG GTGGCTATAT CAAGGCTGAC
GTAATGTTCA GCGATTATGG CAATGGGGCA CCAGATTCGG GGGATTTATC CCGTCAGTTT
TATGTACCGG GTACCATTTA CGGTAAAGAA GGCAATGGTA ACCAAGTGGT GGATTTCCAA
GCCCGTGAGA CGCGATTCAA TTTCAAAGCG ACAACGGATC TTGATGGCCA TAGCTTATCG
GGCTTTATTG AGCTGGATTT TATGACCCAC ACAGATGGTA ATGAGCGGGT GTCTAACAGC
TATTCACCAC GTATCCGCCA TGCCTATGTG TCCTATGATA ATTGGACCGT AGGTCAAACC
TGGACCACAT TCCAAAACCC TGCTGCCTTG CCTGAAAACC TCGACTTTGT GGGTGCTGCA
GATGGTACGC CCTTTGTGCG CCAATCGTTA CTGCGTTATA CCCATGGTAA TTTCCAATTT
GCGATAGAAA ACCCTGAAAC AACGGTAACA CCGAATCAAG GTGGCGCACG GATCACCAGT
GGTAATGGTG TCGTGCCTGA TGTGGTGGCG AGATACAATC TCAAGACGGA CGGTGGCGCC
TCATTCTCGT TTGCAGGTAT TGCTCGGCAA CTCAATTTAG AGACCAAAAT CGGTGCGACT
CAAATCGACA GTTCGAGCTT CGGCTACGGC GCCAGTGTGG CGGGGATTAT TCCCATTGGG
AAAGATGATC TGCGCTTTAC CGCAACCTAT GGTGACGGTT TAGGGCGTTA TATGGCGCTT
AACTATATTA ATGCCGGCGT GTTAGATGCG AGCGGCGATA TTGAATCCAT TCGTACCTTC
GGCGGCTTTG TGTCTTACCG TCATTGGTGG AACGAACAGT GGCGCACCAG TGTGACATTC
TCTGGCATGC AAGCGGATAA TGATGTGGCC TTAACGGGCA CAGGGGTGAA TAAGGATGCT
TATTCTGGCT ATATCAACCT GTTGTATTCC CCTAGCAAAC CATTGACCTT TGGGGTGGAA
TATATGTACG CCCAGAATAG TAAAGAGAAT GGTGATGATG GTGATTTAAG CCGGATCATC
TTCTCGGCGA AGTATGTGCT CTAA
 
Protein sequence
MKQAKLSLLY SATLLAFMGS ANAASLKNTD VEFGGYIKAD VMFSDYGNGA PDSGDLSRQF 
YVPGTIYGKE GNGNQVVDFQ ARETRFNFKA TTDLDGHSLS GFIELDFMTH TDGNERVSNS
YSPRIRHAYV SYDNWTVGQT WTTFQNPAAL PENLDFVGAA DGTPFVRQSL LRYTHGNFQF
AIENPETTVT PNQGGARITS GNGVVPDVVA RYNLKTDGGA SFSFAGIARQ LNLETKIGAT
QIDSSSFGYG ASVAGIIPIG KDDLRFTATY GDGLGRYMAL NYINAGVLDA SGDIESIRTF
GGFVSYRHWW NEQWRTSVTF SGMQADNDVA LTGTGVNKDA YSGYINLLYS PSKPLTFGVE
YMYAQNSKEN GDDGDLSRII FSAKYVL