Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2365 |
Symbol | |
ID | 4252936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2820859 |
End bp | 2822022 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638118990 |
Product | hypothetical protein |
Protein accession | YP_734493 |
Protein GI | 113970700 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000963211 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0778781 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAG CAAAACTTAG CTTGCTTTAC TCTGCAACCT TATTGGCATT TATGGGCTCT GCCAATGCGG CTTCTTTAAA AAATACTGAC GTTGAATTTG GTGGCTATAT CAAGGCTGAC GTAATGTTCA GCGATTATGG CAATGGGGCA CCAGATTCGG GGGATTTATC CCGTCAGTTT TATGTACCGG GTACCATTTA CGGTAAAGAA GGCAATGGTA ACCAAGTGGT GGATTTCCAA GCCCGTGAGA CGCGATTCAA TTTCAAAGCG ACAACGGATC TTGATGGCCA TAGCTTATCG GGCTTTATTG AGCTGGATTT TATGACCCAC ACAGATGGTA ATGAGCGGGT GTCTAACAGC TATTCACCAC GTATCCGCCA TGCCTATGTG TCCTATGATA ATTGGACCGT AGGTCAAACC TGGACCACAT TCCAAAACCC TGCTGCCTTG CCTGAAAACC TCGACTTTGT GGGTGCTGCA GATGGTACGC CCTTTGTGCG CCAATCGTTA CTGCGTTATA CCCATGGTAA TTTCCAATTT GCGATAGAAA ACCCTGAAAC AACGGTAACA CCGAATCAAG GTGGCGCACG GATCACCAGT GGTAATGGTG TCGTGCCTGA TGTGGTGGCG AGATACAATC TCAAGACGGA CGGTGGCGCC TCATTCTCGT TTGCAGGTAT TGCTCGGCAA CTCAATTTAG AGACCAAAAT CGGTGCGACT CAAATCGACA GTTCGAGCTT CGGCTACGGC GCCAGTGTGG CGGGGATTAT TCCCATTGGG AAAGATGATC TGCGCTTTAC CGCAACCTAT GGTGACGGTT TAGGGCGTTA TATGGCGCTT AACTATATTA ATGCCGGCGT GTTAGATGCG AGCGGCGATA TTGAATCCAT TCGTACCTTC GGCGGCTTTG TGTCTTACCG TCATTGGTGG AACGAACAGT GGCGCACCAG TGTGACATTC TCTGGCATGC AAGCGGATAA TGATGTGGCC TTAACGGGCA CAGGGGTGAA TAAGGATGCT TATTCTGGCT ATATCAACCT GTTGTATTCC CCTAGCAAAC CATTGACCTT TGGGGTGGAA TATATGTACG CCCAGAATAG TAAAGAGAAT GGTGATGATG GTGATTTAAG CCGGATCATC TTCTCGGCGA AGTATGTGCT CTAA
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Protein sequence | MKQAKLSLLY SATLLAFMGS ANAASLKNTD VEFGGYIKAD VMFSDYGNGA PDSGDLSRQF YVPGTIYGKE GNGNQVVDFQ ARETRFNFKA TTDLDGHSLS GFIELDFMTH TDGNERVSNS YSPRIRHAYV SYDNWTVGQT WTTFQNPAAL PENLDFVGAA DGTPFVRQSL LRYTHGNFQF AIENPETTVT PNQGGARITS GNGVVPDVVA RYNLKTDGGA SFSFAGIARQ LNLETKIGAT QIDSSSFGYG ASVAGIIPIG KDDLRFTATY GDGLGRYMAL NYINAGVLDA SGDIESIRTF GGFVSYRHWW NEQWRTSVTF SGMQADNDVA LTGTGVNKDA YSGYINLLYS PSKPLTFGVE YMYAQNSKEN GDDGDLSRII FSAKYVL
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