Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2333 |
Symbol | |
ID | 4252904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2782730 |
End bp | 2783485 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638118958 |
Product | hypothetical protein |
Protein accession | YP_734461 |
Protein GI | 113970668 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0434228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.030052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTGGT TACTGATCGC CCTCGCAGGC TTACTCGGCG GCATGTTAAA TGCGGTGGCG GGCGGCGGCA GCTTTATCAC CTTATTTGCC CTTGTGTTTG TGGGTGTACC GCCACTGTTG GCTAACGCGA CGGGCACCGC CGCCCTGCTT CCCGGTTACC TTGCCAGTGC TTGGCGTTTT CGAAAAGAGA TTGAATATCC TGCAAATCTT AACCTAAAAA CCCTGTGCCT GATCGCCATT GCGGGCGGAT GCCTAGGCGC GGCGATTCTG CTAAGCACCA GCGAGCAAGT GTTCGCTAAT CTCGTCCCTT GGCTGATTTT GCTGGCCACA CTCGCCTTTA TTGGTGGACC TTGGTTACTG AAAAAACGCT TAGCGAATGC CAGCATCACT CGTATGAATA CCGTCAAGCC ACTGACTGCA ATGATGATTC TGAGTCTCGT CTGTATTTAC GGCGGCTATT TTAATGGGGG ATTAGGGATC ATTTTACTCG CCACCTTTGG ACTACTCGGC CAGACCCAAT TACATGGGAT GAACGGGCTT AAGAATTTAC TCTCCGCCCT ACTCACCACC ATTGCTGTGG TGATTTACGC CCTAGGAAAT CTGATTGACG GGCAGTATCT ATTACTGCTT GCCATTATGG CGATTATTGG CGGCTATCTT GGCGCCGCGC TAGCTTATCG CATTCCCCAA TCTCTGTTGC GGGGTTTTAT TGTGCTTGTC GGTTTCGCCA TGAGTGTGGG ATTTTTTATG CGTTAA
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Protein sequence | MDWLLIALAG LLGGMLNAVA GGGSFITLFA LVFVGVPPLL ANATGTAALL PGYLASAWRF RKEIEYPANL NLKTLCLIAI AGGCLGAAIL LSTSEQVFAN LVPWLILLAT LAFIGGPWLL KKRLANASIT RMNTVKPLTA MMILSLVCIY GGYFNGGLGI ILLATFGLLG QTQLHGMNGL KNLLSALLTT IAVVIYALGN LIDGQYLLLL AIMAIIGGYL GAALAYRIPQ SLLRGFIVLV GFAMSVGFFM R
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