Gene Shewmr4_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2333 
Symbol 
ID4252904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2782730 
End bp2783485 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content51% 
IMG OID638118958 
Producthypothetical protein 
Protein accessionYP_734461 
Protein GI113970668 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0434228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.030052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGGT TACTGATCGC CCTCGCAGGC TTACTCGGCG GCATGTTAAA TGCGGTGGCG 
GGCGGCGGCA GCTTTATCAC CTTATTTGCC CTTGTGTTTG TGGGTGTACC GCCACTGTTG
GCTAACGCGA CGGGCACCGC CGCCCTGCTT CCCGGTTACC TTGCCAGTGC TTGGCGTTTT
CGAAAAGAGA TTGAATATCC TGCAAATCTT AACCTAAAAA CCCTGTGCCT GATCGCCATT
GCGGGCGGAT GCCTAGGCGC GGCGATTCTG CTAAGCACCA GCGAGCAAGT GTTCGCTAAT
CTCGTCCCTT GGCTGATTTT GCTGGCCACA CTCGCCTTTA TTGGTGGACC TTGGTTACTG
AAAAAACGCT TAGCGAATGC CAGCATCACT CGTATGAATA CCGTCAAGCC ACTGACTGCA
ATGATGATTC TGAGTCTCGT CTGTATTTAC GGCGGCTATT TTAATGGGGG ATTAGGGATC
ATTTTACTCG CCACCTTTGG ACTACTCGGC CAGACCCAAT TACATGGGAT GAACGGGCTT
AAGAATTTAC TCTCCGCCCT ACTCACCACC ATTGCTGTGG TGATTTACGC CCTAGGAAAT
CTGATTGACG GGCAGTATCT ATTACTGCTT GCCATTATGG CGATTATTGG CGGCTATCTT
GGCGCCGCGC TAGCTTATCG CATTCCCCAA TCTCTGTTGC GGGGTTTTAT TGTGCTTGTC
GGTTTCGCCA TGAGTGTGGG ATTTTTTATG CGTTAA
 
Protein sequence
MDWLLIALAG LLGGMLNAVA GGGSFITLFA LVFVGVPPLL ANATGTAALL PGYLASAWRF 
RKEIEYPANL NLKTLCLIAI AGGCLGAAIL LSTSEQVFAN LVPWLILLAT LAFIGGPWLL
KKRLANASIT RMNTVKPLTA MMILSLVCIY GGYFNGGLGI ILLATFGLLG QTQLHGMNGL
KNLLSALLTT IAVVIYALGN LIDGQYLLLL AIMAIIGGYL GAALAYRIPQ SLLRGFIVLV
GFAMSVGFFM R