| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2310 |
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| Symbol | |
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| ID | 4252881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2756136 |
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| End bp | 2758334 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118935 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_734438 |
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| Protein GI | 113970645 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0299343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAACA AAAAGTCTAC CAAGAGTTCC AACTTCTCCT TTTCGTTAAC GCGTGCGCCA
TTAGCGCTGG CCATTTCGGC TGCGTTAAGC ACGGCCGCAT GGGCGCAAAC CGATGCTATC
GATAAACCTG AGCCTAGCAA TGATATGGAA ATCATGGTGG TGACTGCGGA TTTTCGCAGT
GCCAGTTTAG AAAAAATGCC ATCGAGCATT ACCGTTATCG ATGCCCAGCA AATCCAAGAT
GAAAGCGCCC AACACTTTGA AGACGTGATG AATTCCATCG CTAACTTTAA CTGGTCGGGT
GGCAGCTCAC GTCCTAAGTA TTTCCAGATC CGTGGCGTAG GGGAGCAGGA GCAATATCAA
GGTGCACCTA ACTCATCTGT GGGTTATATC ATTGATGATA TTGATTTATC TGGTATTGGC
ATGGTGTCGA GTATGTACGA TCTGCAGCAG GTCGAAGTGT TACGCGGCCC GCAGGGTACC
CGCTATGGCG CCAATGCGTT AGCGGGCTTG ATTTACCTTA AGAGTAATGA CCCGACCGAT
GTGTTTGAAC ATGGCGCCGA GGCCTCTTTA GGCAATGACG ATTTGCAAAC CTTTAGCGGT
TTTAGCTCAG GGCCGTTAAC CGATTCGGGT AAATTGTTGT ACCGTGTGTC GCTGCAGCAA
CATCAACAAA ACGGTTATCG CGATAATCTG TATTTAAATA AAGAAGATAC CAATGGTCGT
GATGAATTTA CTGGTCGCGC TAAATTACGC TGGTATGCCA CCGACAATCT GCAACTCGAT
TTAACTCTGC TGCATGCCGA TTTTGATAAC GGCTACGATG CCTGGAGCTT AACCAACGAT
CCTAAACATA CTATTTCGGA TCAGCCGGGT GTCGATAGCC AGCGCACCAC GGGCGCAGGA
TTTAAAGCAA CTTACTCGGG CGCTGAGTCG TTTGAGTTAA CCTCGCTGAC TTCATTTGCC
AATACCGATC ACCATTATAG TTACGATGGC GATTGGGCGA ACCCTGAATA TTGGGCCTCC
AAGCAATGTG AGGATGAGGG CAATCTCGCC CCTTGTCAGT ACGATTACTT CTGGGACAAA
ACCGGTCAGC GTAAGACCTT ATCCCAAGAG TTCCGCTTAA GCTCGACCGA CCAAGGTCGT
ATTTTTGCCG GCTCAACCGA CTGGTTACTT GGGGTTTATG CGATGAACCT TAAAGAAGAT
AACCAACTGT ATTCTGAATA TAATACTTGG CCCGATGAGG TGTTAGATTC CGAATATGAA
GCAACTAATT ACGCCGTATT TGGTCAGCTG GATACGGATT TAGGCGCCGA TTATGCCTTG
TCTGTGGGGC TGCGTGTTGA GCGTCGCAAT AGCCACTACT CAGACACTAA CAATGATAAT
TTTGATCCGA GTGAAACCAT GTGGGGCGGC CATATTGCGC TGAGCAAAGT GCTGAATGAA
TCCCATAATG TGTACGCCCG TGTGGCGCGC GGTTACAAGG CGGGCGGTTT TAACATGACC
TTGCCAGTCG AACTCAATGA TAAAAAAGAG TTTGATACCG AAACCCTATA CAACTACGAA
ATCGGTCTTA AATCCCATTG GTTTGAAGGG CTTATCGATA CGAATCTGGC GCTGTTCTAT
ATGGACAGAC AGGATCAGCA AGTGGCCGCA TCCCAGCAAG ATCCTAACAA GCCACAACGC
TTTATCCTCT ACACTGAAAA TGCGGGTAGC TCACACAACT ACGGTGCCGA GTTGGACGCC
ACTTGGTATG CCACCGATAA TCTCCAGTTT TACTCAAGCC TAGGTTGGTT AGAGACGGCG
TACGGCGATT ACCAGTACCA AGATAAATAC GGTAGCGATG TGGATTTAAC GGGTCGCGAT
TTGGCCCATT CACCACACTT GACCTACAGC TTAGGCGGCA CCTATCGTGC GAACTCGGGT
TGGTTTGCCA ACGTCAACAT GAGTGGTAAG AGTGAGTTTT ACTACTCAGA CAGCAACGAC
TCGCGCTCTG AGCCATACAC CATTGTGAAT GCGCGCTTAG GTTACGAGGC GAGTGCTTGG
TCGGCGTATT TATGGGGCCG CAACCTGTTC GATGAAGAAT ATGGTGTGCG TGGTTTCTAT
TTTGGCAATG AGCCGGATAA CGGCTGGGCG GAAAAGCAAT ATATCCGCTA CGGCGACCCA
CGCCAAATTG GGGTCACACT AAACGTTAAG TTTATGTAA
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| Protein sequence | MYNKKSTKSS NFSFSLTRAP LALAISAALS TAAWAQTDAI DKPEPSNDME IMVVTADFRS
ASLEKMPSSI TVIDAQQIQD ESAQHFEDVM NSIANFNWSG GSSRPKYFQI RGVGEQEQYQ
GAPNSSVGYI IDDIDLSGIG MVSSMYDLQQ VEVLRGPQGT RYGANALAGL IYLKSNDPTD
VFEHGAEASL GNDDLQTFSG FSSGPLTDSG KLLYRVSLQQ HQQNGYRDNL YLNKEDTNGR
DEFTGRAKLR WYATDNLQLD LTLLHADFDN GYDAWSLTND PKHTISDQPG VDSQRTTGAG
FKATYSGAES FELTSLTSFA NTDHHYSYDG DWANPEYWAS KQCEDEGNLA PCQYDYFWDK
TGQRKTLSQE FRLSSTDQGR IFAGSTDWLL GVYAMNLKED NQLYSEYNTW PDEVLDSEYE
ATNYAVFGQL DTDLGADYAL SVGLRVERRN SHYSDTNNDN FDPSETMWGG HIALSKVLNE
SHNVYARVAR GYKAGGFNMT LPVELNDKKE FDTETLYNYE IGLKSHWFEG LIDTNLALFY
MDRQDQQVAA SQQDPNKPQR FILYTENAGS SHNYGAELDA TWYATDNLQF YSSLGWLETA
YGDYQYQDKY GSDVDLTGRD LAHSPHLTYS LGGTYRANSG WFANVNMSGK SEFYYSDSND
SRSEPYTIVN ARLGYEASAW SAYLWGRNLF DEEYGVRGFY FGNEPDNGWA EKQYIRYGDP
RQIGVTLNVK FM
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