Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2306 |
Symbol | |
ID | 4252877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2752743 |
End bp | 2753615 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118931 |
Product | hypothetical protein |
Protein accession | YP_734434 |
Protein GI | 113970641 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0300856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAG GTGTGTTGTT ACTGGTGTTG CTGTTTGGCT TAACGGCCTG CTCGACCAAA TTTAGTTATC ATTTTCTCGA CTGGGCCATA GGTTGGGAGC TGGATGACTA TGTCAGCCTT GATAAAAACC AGCAAAAGGT CGTCGATGGG CTTATCGACA AGTTTGTACT TTGGCACCAA TCCGAAGAAC TCGGCCATTA TGTGGCGCAG CTAACCGAAG TTGAGCAGCA GATCCAAACC AATACCTTAA CTCCCGCATT GTGGGCCGAG CATGTCACAC TCGCCAAACG GCATTGGTTT CGGCTATTTG AGTTTGCACT GCCGGAAATG TTGCCGATCA TCTCATCATT AACCGATGAA CAGGTGAAGC AAATTCTTGC CCAGTCGCGA AAAGACGAGC AGGAATTGAT TAAGGAATTT GCTGGTAAAA CCCCCGAGCA GTTACAACAA GAGGCCGATG AGAATCTTAT TGAGCAATTT GATGACTGGC TGGGTAGTGT AACGGATGAG CAAAAAACGC TTATTCATCA ATATAATCAG CAGCGACTGT CGACCTTAGA TATGTGGCTC GATTACCGCC ACGAATGGCT GCGCCAATTT GAGGTTGCCC TTGGGCAGCG CAGCGATATT CCGCTGTTGA CCGAACGATT GACCCTGTTG ATGACGCGCC CTGACGAGCT TAAGTCGGAA AAGCACCGCG CCATTTTAAG GCAAAACACC GAAGCCTTCG GCGGCTTGTT ACTCACGATC AATGCCAGTC TGTCGGCGAA GCAGTCCAAG CATTTTTATA AAAAGCTGAA TAAGCTTATT CAGGATCTTC GTGAACTAAA TCAAGAGGGG ATCGAAAAAG TGGCAAAAGC CACGAAAGAT TAA
|
Protein sequence | MKKGVLLLVL LFGLTACSTK FSYHFLDWAI GWELDDYVSL DKNQQKVVDG LIDKFVLWHQ SEELGHYVAQ LTEVEQQIQT NTLTPALWAE HVTLAKRHWF RLFEFALPEM LPIISSLTDE QVKQILAQSR KDEQELIKEF AGKTPEQLQQ EADENLIEQF DDWLGSVTDE QKTLIHQYNQ QRLSTLDMWL DYRHEWLRQF EVALGQRSDI PLLTERLTLL MTRPDELKSE KHRAILRQNT EAFGGLLLTI NASLSAKQSK HFYKKLNKLI QDLRELNQEG IEKVAKATKD
|
| |