Gene Shewmr4_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2306 
Symbol 
ID4252877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2752743 
End bp2753615 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content47% 
IMG OID638118931 
Producthypothetical protein 
Protein accessionYP_734434 
Protein GI113970641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0300856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GTGTGTTGTT ACTGGTGTTG CTGTTTGGCT TAACGGCCTG CTCGACCAAA 
TTTAGTTATC ATTTTCTCGA CTGGGCCATA GGTTGGGAGC TGGATGACTA TGTCAGCCTT
GATAAAAACC AGCAAAAGGT CGTCGATGGG CTTATCGACA AGTTTGTACT TTGGCACCAA
TCCGAAGAAC TCGGCCATTA TGTGGCGCAG CTAACCGAAG TTGAGCAGCA GATCCAAACC
AATACCTTAA CTCCCGCATT GTGGGCCGAG CATGTCACAC TCGCCAAACG GCATTGGTTT
CGGCTATTTG AGTTTGCACT GCCGGAAATG TTGCCGATCA TCTCATCATT AACCGATGAA
CAGGTGAAGC AAATTCTTGC CCAGTCGCGA AAAGACGAGC AGGAATTGAT TAAGGAATTT
GCTGGTAAAA CCCCCGAGCA GTTACAACAA GAGGCCGATG AGAATCTTAT TGAGCAATTT
GATGACTGGC TGGGTAGTGT AACGGATGAG CAAAAAACGC TTATTCATCA ATATAATCAG
CAGCGACTGT CGACCTTAGA TATGTGGCTC GATTACCGCC ACGAATGGCT GCGCCAATTT
GAGGTTGCCC TTGGGCAGCG CAGCGATATT CCGCTGTTGA CCGAACGATT GACCCTGTTG
ATGACGCGCC CTGACGAGCT TAAGTCGGAA AAGCACCGCG CCATTTTAAG GCAAAACACC
GAAGCCTTCG GCGGCTTGTT ACTCACGATC AATGCCAGTC TGTCGGCGAA GCAGTCCAAG
CATTTTTATA AAAAGCTGAA TAAGCTTATT CAGGATCTTC GTGAACTAAA TCAAGAGGGG
ATCGAAAAAG TGGCAAAAGC CACGAAAGAT TAA
 
Protein sequence
MKKGVLLLVL LFGLTACSTK FSYHFLDWAI GWELDDYVSL DKNQQKVVDG LIDKFVLWHQ 
SEELGHYVAQ LTEVEQQIQT NTLTPALWAE HVTLAKRHWF RLFEFALPEM LPIISSLTDE
QVKQILAQSR KDEQELIKEF AGKTPEQLQQ EADENLIEQF DDWLGSVTDE QKTLIHQYNQ
QRLSTLDMWL DYRHEWLRQF EVALGQRSDI PLLTERLTLL MTRPDELKSE KHRAILRQNT
EAFGGLLLTI NASLSAKQSK HFYKKLNKLI QDLRELNQEG IEKVAKATKD