| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2276 |
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| Symbol | |
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| ID | 4252847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2720087 |
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| End bp | 2720782 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638118901 |
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| Product | anti-ECFsigma factor, ChrR |
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| Protein accession | YP_734404 |
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| Protein GI | 113970611 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAAAC ATCATCCCCA TACCGATTTA CTGTTAGCCC ATGCACAAGG CGAGCTGCCT
TTATCCATGT CTATCGCAAT CTCGGCCCAT TGTGCCCTAT GTCATGAGTG CCAATCCCAA
GTCAGCCGCT TTACAGAGCA GGCGGCTGAA CTCGCCTTTT TAGCGCCGAG CAAAATCACT
GAACAAGCTT TAATCAGCGA AACCGATTCA GCACAAGATG ACGCTTGGCA GCAAATGATG
TCACAGATTA TGGCCTTACC CGAATCAACG CCAACTGAAA GCGACTATCC TGCTAAAACT
ACGGTTTCCC TTAATCATAA ACATGTGCGT TATGAGATCC CGAGAGTGTT TCGTCAGCAT
ATCGCCCATC CATGGCAACA AATTGGCAAG GTCAGCCGCA TGCGTTTCGA TGTGGATGAA
AATAATACCC GCGCGAGCCT TTTACATATC GATGCTTTAG GTGAGATCCC GCAGCACACC
CATAAAGGAT ACGAACTGAC CTTGTTATTA GCGGGCGAAT TTTCGGATCT TCACGGCCAA
TATGTTCCTG GTGATTTTAT TATCTTAGAC GGGAAAACCC ATCATTCTCC CAAGACCCAA
ACAGGATGCC TCTGTTACAC AGTGTTAGAC GCACCGCTGT ATTTTACAAA AGGGCTCAGT
AAATTATTGA ACCCGATTGG AGAACTGATT TATTAA
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| Protein sequence | MIKHHPHTDL LLAHAQGELP LSMSIAISAH CALCHECQSQ VSRFTEQAAE LAFLAPSKIT
EQALISETDS AQDDAWQQMM SQIMALPEST PTESDYPAKT TVSLNHKHVR YEIPRVFRQH
IAHPWQQIGK VSRMRFDVDE NNTRASLLHI DALGEIPQHT HKGYELTLLL AGEFSDLHGQ
YVPGDFIILD GKTHHSPKTQ TGCLCYTVLD APLYFTKGLS KLLNPIGELI Y
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