Gene Shewmr4_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2260 
Symbol 
ID4252831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2702130 
End bp2702561 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content48% 
IMG OID638118885 
Producthypothetical protein 
Protein accessionYP_734388 
Protein GI113970595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00464022 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.48524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCAG TTAAGCAAAC AGCCGTTGCA GTTGCGTTAG GTACAGTGGT GGTCGGTTCT 
GCGTTTGCCG TGAATGCGCA AACCAACCCA TTCGGATTTG AAACCATGGA AGCGGGTTAT
CAAATCGTCG GTTCAGAAGG TAAATGCGGC GAAGCTAAAT GTGGTGGCGA TATGAAAAAA
GCCGCAGCCG AAAAAGCCAA AGAAGGTAAA TGTGGCGAAG CCAAATGTGG TGCCGACATG
AAGAAAGCCG CTGCTGATAA AGCCCACGAA GGCAAATGCG GTGAAGCTAA ATGTGGCGCC
GATATGAAAA AAGCCGCAGC CGATAAAGCC CACGAAGGTA AATGTGGTGA AGCTAAATGC
GGTGGCGATA TGAAGAAAAC CGCTGAAAAA GTCGAAGCTA AGGCCGACGC AGTCAAAAAA
GAGATGAAAT AA
 
Protein sequence
MKSVKQTAVA VALGTVVVGS AFAVNAQTNP FGFETMEAGY QIVGSEGKCG EAKCGGDMKK 
AAAEKAKEGK CGEAKCGADM KKAAADKAHE GKCGEAKCGA DMKKAAADKA HEGKCGEAKC
GGDMKKTAEK VEAKADAVKK EMK