| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2198 |
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| Symbol | |
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| ID | 4252771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2626053 |
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| End bp | 2627078 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118824 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_734328 |
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| Protein GI | 113970535 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.83837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGAG ATTTATTACA AACCGCAGCC TTGAATCTTA AAAAAGCGGT TCCCTTAATG
CTCAAACATC AAATTCCCAC CACGCCAATC AATTATGCCC TCTGGTATAC CTATGTTGGG
GAACAAAACC CAGCACTCAA TGCCCAGCTT GATACTGTGA TTGCTCACTA CAACACCTGC
CCGCCCGTGA GCAGCGAGTT GTTGTTCCGC CAGTATGTCG CAGATCCAGT TGAGCTGGAT
GTACGCGATA TGCGGCTAAA CCTTGAGGCC ATGGCCACAG AATTATCGCA ATCAATTCGG
GATACCAATC TGGATGCAAC TGAGTTCCAA AGCTGTATTA ACACTAACTT TGCCAAACTC
AATGGCATCG AAGAAGGTGC GCTCAGTGTT GAGCAAGTGC TCGATTTAGT ACGCAATTTA
GTCAAAGAAT CCGAGAATAT TCGCTCAAGT ACCGAGTTTT TTACTGCCCA ATTACAAAAA
GCCCAGACAG AGATTGATGC GCTGAAGCAA AAGCTCGAAA AAACCGAAAA AGATGTACTG
TATGACGCGC TGACCGGCTG TTTAAACCGC CGCGCTTTCG ACGCCGATAT CGCCGGCATG
TTGGCTCAGG CGCCCGAGGG CACCTGTCTT ATCTTTGTCG ATATCGATCA CTTTAAGGCC
TTTAATGATA ATTACGGCCA CCAGCTAGGC GATCAAGTAT TAAAAGCGGT GGCAAAGCGC
TTGCAGGAAG CCTGTCGTGA TGGCTGTAAG TTATACCGCT TCGGTGGCGA AGAGTTCGCG
ATTGTGGTGC CTAAGAGCCA ACTGCGTATT GCGCGGCAAC TGGCTGAAGC CATGCGCCGC
GGCCTTGAAA AACTCAGCCT CAAGGATAGA CGTAAGGATC AACGTATCGA TCATATCACC
GCCTCCTTTG GTGTCGCCCA GTGGCAAGAA AAGCAATCCG TAATGCAACT GATTGAAAAA
ACAGATAAGT TGCTTTACGA GGCCAAACGC CTAGGCCGCA ACCGAGTCAT GCCGATAAGC
AACTAA
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| Protein sequence | MSRDLLQTAA LNLKKAVPLM LKHQIPTTPI NYALWYTYVG EQNPALNAQL DTVIAHYNTC
PPVSSELLFR QYVADPVELD VRDMRLNLEA MATELSQSIR DTNLDATEFQ SCINTNFAKL
NGIEEGALSV EQVLDLVRNL VKESENIRSS TEFFTAQLQK AQTEIDALKQ KLEKTEKDVL
YDALTGCLNR RAFDADIAGM LAQAPEGTCL IFVDIDHFKA FNDNYGHQLG DQVLKAVAKR
LQEACRDGCK LYRFGGEEFA IVVPKSQLRI ARQLAEAMRR GLEKLSLKDR RKDQRIDHIT
ASFGVAQWQE KQSVMQLIEK TDKLLYEAKR LGRNRVMPIS N
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