Gene Shewmr4_2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2194 
Symbol 
ID4252767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2621552 
End bp2622004 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content46% 
IMG OID638118820 
Producthypothetical protein 
Protein accessionYP_734324 
Protein GI113970531 
COG category[S] Function unknown 
COG ID[COG3085] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0102079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC AGTCTTTTTC AAACGCTAAC AAGGGTTCTG AGACGGTGAA CGGCTCAGCT 
GCCAGCTTTA TATCCCATAA ACGTTTTTAT GACGATACCA ATTTCCCTAA AGGTTTTAAG
CGGAGTGGCG ACTTCACCAG TAAAGAGGCC GAACTGCTTG AATTACATGG CCATGCCATG
AAAAACCTCG ATGAAGGCAA GTCGCTCCCT GTCACCGCAG ACGAGGCGCA ATTTGTCGAA
GTCATCAAAG GAAACATCGC TCCCAGTAGC TTGTTAGAGC ATATCTGGTT AAAGTACCGC
AAACTCTCTC AGGGTAAGCC CTTTTATGCT GTAGTTGGCA CTGTTCATTT ACCTGCCACT
AAACCTGAGG TTGAGCCAGA AGCGGCATTC GATGTGGATG TCGAAATTGA AGATGATGTT
CAGGATGAAG CTGAACCCGA GGATAAAGAA TGA
 
Protein sequence
MSEQSFSNAN KGSETVNGSA ASFISHKRFY DDTNFPKGFK RSGDFTSKEA ELLELHGHAM 
KNLDEGKSLP VTADEAQFVE VIKGNIAPSS LLEHIWLKYR KLSQGKPFYA VVGTVHLPAT
KPEVEPEAAF DVDVEIEDDV QDEAEPEDKE