Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2162 |
Symbol | |
ID | 4252735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2589864 |
End bp | 2591411 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118788 |
Product | MltD domain-containing protein |
Protein accession | YP_734292 |
Protein GI | 113970499 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000015187 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0463947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGTAT CACTTTATGT TGTAGTAGGG GGATTTGCCC TACTCACAGG TTGTCAGACC TTAGACAACC ATCAGGTGAC CAAACCTGAA GCTGAAACCG TCACAACCGA AAATAGCGTC CCACAGTATT ATCTCGCAAC CGAACCTGAA TCGGCGCAAA TTACTGATGT TTGGGAGCGA ATTCGTCAAG GAATGCAACT TCCGGTTCCT GACAAAAAAT TAGTTAACTA TTATCGCGAT TGGTACATTA GCAACCCCAA ACACCTCGAA GTGATTTCTG AGCGTGCGGC GCCTTACATG TATTTGATCG TCGAAGAGCT TGAAAAGCGC CATCTGCCGA TCGAGATCGC ACTCTTGCCT ATTATTGAAA GTGCTTTCGA TCCCAGTGCT TCATCGGCCA GTGCTGCATC TGGGCTTTGG CAATTTACGA CTCCAATGGC AAGCCATTTT GGGTTAGAGA TGAATTGGTG GTACGACGGC CGTCGTGATG TGCCCGCCTC CACCGTAGCC GCCTTGGACA TGCTCGAATA CCTGTACGAC AAAACCAATA ATAATTGGCT CTATGCGATT GCGGCCTACA ATTCTGGTGA GTCTCGCGTC CTCAATGCGA TTAAACGCAA TGAGGATAAA GGACTTAAAA CCGATTTTTG GTCACTCGAT CTCCCAAAAG AGACTGAGCG TTACGTGCCA CAATTATTGG CCCTTGCCGA AGTGATAAAA CATGCCGACG AGTACGGTAT TACACTCGCG CCAATTGATA ACAGCCCTTC TATCGAAGTA GTTGATATCG ATAGCCAAAT TGACTTGGCC ATGGCGGCAG GGCTCGCCAA TATGACGACC CATGAGCTAT TAAAACTCAA TCCTGGATAC AATCGCTGGG CGACCGCTCC GACTGGCCCC CATACCTTGG TATTGCCGAT TGATAAGTCA GAAGAGTTTA AAAAAGCACT GGCCGAAACC GAGAGTGATG CCCGTGTGAG TTGGCTCAGA TACACCATTA AATCCGGTGA CAGTATCGGC GCCATCGCCC AGAAACACCA TACCACAGTC AATGCGATCC GCGCGGCTAA TGGTATGAAA AATAACACTA TCGTCGCTGG AAGACATCTG ATTATCCCCG TATCCGCCGA CGATAAACAG CTATATGCGA TGTCAACCAG CCAGAAATTA CCCAAAAAAG CGGCAACTTC GACCTCTGGC AATAAGTTGA CTTACCAAGT GAAATCCGGC GACACCCTGT GGCAAATAGC TCAAGCTCAT AAAGTATCGG TTAAGCAGCT CACTGCTTGG AACCATTTAA GCAAAGACAG TAAATTGCAG ATGGGCCAAA AACTGATCAT AGTAGCACCG CAAACCCAAG TTGCGGCGGA GCAAATTCGT ACCGTCAGCT ACAAGGTGAA ATCTGGTGAT TCGTTAGCAC GCATTGCCAG CAAGTTTAAA GTGACCGTCG CTGAACTGCT CGAATGGAAC AGCTTAACGC CATCACAATA TATTCAACCC GGCCAAGTGT TAAAGCTGGT TGTGGATGAA AGCAATTTAA ATGCCTAA
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Protein sequence | MRVSLYVVVG GFALLTGCQT LDNHQVTKPE AETVTTENSV PQYYLATEPE SAQITDVWER IRQGMQLPVP DKKLVNYYRD WYISNPKHLE VISERAAPYM YLIVEELEKR HLPIEIALLP IIESAFDPSA SSASAASGLW QFTTPMASHF GLEMNWWYDG RRDVPASTVA ALDMLEYLYD KTNNNWLYAI AAYNSGESRV LNAIKRNEDK GLKTDFWSLD LPKETERYVP QLLALAEVIK HADEYGITLA PIDNSPSIEV VDIDSQIDLA MAAGLANMTT HELLKLNPGY NRWATAPTGP HTLVLPIDKS EEFKKALAET ESDARVSWLR YTIKSGDSIG AIAQKHHTTV NAIRAANGMK NNTIVAGRHL IIPVSADDKQ LYAMSTSQKL PKKAATSTSG NKLTYQVKSG DTLWQIAQAH KVSVKQLTAW NHLSKDSKLQ MGQKLIIVAP QTQVAAEQIR TVSYKVKSGD SLARIASKFK VTVAELLEWN SLTPSQYIQP GQVLKLVVDE SNLNA
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