| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2121 |
|---|
| Symbol | |
|---|
| ID | 4252694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2531982 |
|---|
| End bp | 2532917 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638118745 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734251 |
|---|
| Protein GI | 113970458 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.347339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAATG TGAGTTTTTA CCCAATCGGG ACAGTCGGTG AAAAATGGGG CGATGCCGAA
AAGGCCGCAT GGTTTGCTAG TACGCAAATT AAGCGTTCTT ACCATGACAA TGTTGTTACG
CCACTAAAAG CGATGGAGTC ACAACTGGCC GAAATAGGGC TGAGTGTGGT GCAATATGGC
GCCTTATCGA TTGATTCTGC ACGTTATCCC TTGTTTGCGG TTAGATCTGC TACGTTCGAT
CCGAACAAGA AAACCGTCTT AGTCACAGGT GGTGTACACG GCTACGAAAC CAGCGGCGTG
CATGGCGCCT TGGCTTTTTT GGCTAACAAC GCGGCTCACT ATGCAAACCG GGTAAACTTA
GTGGTGGCAG TGTGTGTAAG CCCTTGGGGT TATGAGACTA TTAATCGCTG GAACCCGAAA
GCTATCGATC CAAACCGCTC GTTTTATGCC AATAGCCCAG CTGAAGAGTC GGCAGCATTG
ATGGCACTGG TGGCAAGTGT CCCACAAGGT TTTGATGTGC ATGTGGATTT ACATGAAACC
ACCGACTCGG ATGAAGATGA ATTTCGCCCA GCCTTGGCCG CGCGTGATGG CAAAGACTTT
ATTCCCGGCA CCATTCCTGA TGGTTTTTAT GCCGTAGGCG ATACCGAAAA TCCACAGGAT
GCCTTCCAAA AGGCGATTAT CGACGGGGTG AGTAAAGTCA CTCACATCGC GCCCGCCGAT
GAAAAGGGCG AGATTATCGG TTCGACAGTG GTGCAACACG GGGTGATCAA CTACCCATTG
AAAGCGCTAG GTTTATGCAG CAGTGTGACG GGTTGTATTT ATAACACCAC CACGGAAGTG
TATCCCGACA GCCCATCGGC CACGCCTGCA GAGTGCAACT TAGCCCAAGT CGCGGCAATC
ACTAGTGCCA TCGACTATGT ATTAGCGTTG AACTAA
|
|---|
| Protein sequence | MANVSFYPIG TVGEKWGDAE KAAWFASTQI KRSYHDNVVT PLKAMESQLA EIGLSVVQYG
ALSIDSARYP LFAVRSATFD PNKKTVLVTG GVHGYETSGV HGALAFLANN AAHYANRVNL
VVAVCVSPWG YETINRWNPK AIDPNRSFYA NSPAEESAAL MALVASVPQG FDVHVDLHET
TDSDEDEFRP ALAARDGKDF IPGTIPDGFY AVGDTENPQD AFQKAIIDGV SKVTHIAPAD
EKGEIIGSTV VQHGVINYPL KALGLCSSVT GCIYNTTTEV YPDSPSATPA ECNLAQVAAI
TSAIDYVLAL N
|
|---|
| |