Gene Shewmr4_2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2092 
Symbol 
ID4252665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2493557 
End bp2494069 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content49% 
IMG OID638118716 
ProductCheW protein 
Protein accessionYP_734222 
Protein GI113970429 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.557103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACC GCACGAACAC GGTGAGTAAG CAGGAGTACA GCGTCCACGA TGAGGTCGAG 
TTTTTAAGTT TTGTGCTGGG TGAAGAACAC TATGCGCTCG ACATTATGTC GGTGAAGGAG
ATCCGCGGGT ATGAGCCTGT CACCAAAATC GCCAATGCGC CGAGTTTTAT CAAAGGCGTA
CTGAATCTTA GGGGCGATAT CGTACCTATT GTCGATTTAA GGATGAAGTT TGCCGTGGGC
AGTGCGACCT ACAACGAGTT CACCATCGTC ATTATGTTGA ATGTGTTTGA CCGTATCGTC
GGGATTGTCG TCGATGCGGT GTCGGATGTG ATTAAACTCG CCGCCGAAGA AATTCTACCC
GCCCCCGAAT TTGGGGTGGC CTTCGATAGC CGTTACCTCA AGGGGCTGGC AACGGTAGAA
GACAAGATGA TCATTTTGGT AAATATACAG GCTCTGATCA GCAGTGATGA GCTGGGTCTA
ATTGATGCAA ATAGTCTGTC TGATCAGGAG TAA
 
Protein sequence
MDNRTNTVSK QEYSVHDEVE FLSFVLGEEH YALDIMSVKE IRGYEPVTKI ANAPSFIKGV 
LNLRGDIVPI VDLRMKFAVG SATYNEFTIV IMLNVFDRIV GIVVDAVSDV IKLAAEEILP
APEFGVAFDS RYLKGLATVE DKMIILVNIQ ALISSDELGL IDANSLSDQE