Gene Shewmr4_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2017 
Symbol 
ID4252590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2401699 
End bp2402322 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID638118630 
Producthypothetical protein 
Protein accessionYP_734147 
Protein GI113970354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000437786 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATAAAA AATGGTGGTT AGTGGGGCTT TGCTTGTGTG CGACAAGTCT GCAGGCAGAA 
ACGATTTCCC TCGAATATAA AGGCTTTTAT GACAGATTAA AGCAAGTCAA TAAGGGAAAT
TATCAGTTAG TCGAAATCGC CTTTAGTGTA CCAATGCTAC CTAATTGTCA GATCCAGAGT
GGAAGCATTT CGAGTGAATT AAATTCAACG CCACTCACTT ATACTGCGGC GCAGCGGTTG
TTTATTCCCT TTGATGACGC GCTTAAAGAT CAACGCGCAT TAGTGAATCT AGAGTTTGAA
GGCAAGGCTG AGGGCTGTGG TATTGCAATG CAAGTCAGAG CTAAGCAGAC TTTAGCCACA
TACGACAAGG CGCGACTAGC GCAAATCGCC AGCGAAATGG ATGCTTTACT CGGAGCCATG
CAGGGCTTCC CGATGCGCTA TTTTAAGGAG CCAATCGCGG GATTAAACTT TGAATTTGCT
CAAGACCAAG CCGTTACTGT GACGCTTGAT GGGCGTGAGC AACAGGTGAA CAGCAGCTTT
AAGTTGAGTG TTGAGCAGCT TAACAGCTTG ACGTCGTTGC AATTTAGCCA GGCGCCGACC
GTATTGAGCC CTTGGGTTAA GTAA
 
Protein sequence
MHKKWWLVGL CLCATSLQAE TISLEYKGFY DRLKQVNKGN YQLVEIAFSV PMLPNCQIQS 
GSISSELNST PLTYTAAQRL FIPFDDALKD QRALVNLEFE GKAEGCGIAM QVRAKQTLAT
YDKARLAQIA SEMDALLGAM QGFPMRYFKE PIAGLNFEFA QDQAVTVTLD GREQQVNSSF
KLSVEQLNSL TSLQFSQAPT VLSPWVK