| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2002 |
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| Symbol | |
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| ID | 4252575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2387404 |
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| End bp | 2388699 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638118615 |
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| Product | phage integrase family protein |
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| Protein accession | YP_734132 |
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| Protein GI | 113970339 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0997607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000242196 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCTTC CTCCCGTATT ACCATTATTT GATTCAATTC AGTTCATACA AGACGGCAAC
AGTGTGGTGA ATCAATACAT CACTCAAGTC AGTCTTGCTG ACGTACCGGA TGCGGGTTTA
GTGATGGAAC ACGCAACTGA TTGGTTATTT GAGCAAAAAC ACAGTGAAAA CAACTATAAA
GCCTATCGGA GTGAAGTAAC TACGTTCCTG CATTGGTGTT TTGATGTCGC GAAAATGTCG
CCCACACAGG TGCTACGTAA GGATATGAGT CGCTATGTGG ATTACTGCCT GGCGCCACCA
TTAATGCTAA TCGGTTACTT TAACGTGCCA CAGTTTAAAC TCGATAAATT GCGGGATGAG
CGAGTGCCCA ACAGCCTTTG GCGGCCATTT GTCGGCAAGA AAACCCTTGG GCAAGTGCAA
CCTTATGTGC TGAGCGATAA CGCGTTAAAG ACTAAGATTG CCATTTTATC CTCGTTTTAT
AGCTACTTAA TGAGCGAGGA GTTTTGTGAG CGCAATCCTG CACAAATTTG GTTGAATCAC
AGTCGCTTTG GCCAAAACAA ACAATACCAA AGACAAACTG ATGAAGATGA AAACAGCTTG
GCTTTCACTG AATTACAGTG GTCCTATGTG ATGAGCACAG TCACTCAATT AGCTGAAACG
TCACCCGAAT TACATCAACG AAGTTTGTTT TTGATTTCAT TAATTTATTC TTGCTACCTA
CGTATTTCAG ACGTATCCGC TCGGGTTGGC TATGCGCCCG TTATGGGGCA ATTTAGGCAA
AATCCACAGA CGGGTATTTG GAGTTTTCAC ATTCCACTCA GTAAAGGCGG GAAAAAACGT
AGCGTTGCGA TTTCTAAGGC GTTACTCGAT GGTTTGGTTA AATACAGGCA ATTTTTGGAG
CTGTCAGATT TTCCAAACCA AGGCGAACAT CATCCTTTGT TTGTACGCCA TCGTGCCGCC
GGTCGCGGCC GCGACGCGGG TCTTGTAAAT GCCAATCTTG GGATCCGGCA AATCCGCGAA
GACATTCAAA CCATTATCAA TCTCGCGGCG GATAATGCAC AAACCGATGG CTTTGGCCAA
GATGCAGAGC AAATGCGAAA ACTCACCGCG CACAACATTC GGCACACGGG GATCACTCAT
GATATCAACA TCAATCGTCG GCCATTGTCA CACGTACAAG CCGATGCGGG TCATGAGAGT
ATCGACACCA CATCGAAATA TTTGCATACC ACACAAATAG AAAGACACGA AAGCGCCTTT
AATAAGCCAT TAGACCATCT ACAAGGCATT GGCTAG
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| Protein sequence | MQLPPVLPLF DSIQFIQDGN SVVNQYITQV SLADVPDAGL VMEHATDWLF EQKHSENNYK
AYRSEVTTFL HWCFDVAKMS PTQVLRKDMS RYVDYCLAPP LMLIGYFNVP QFKLDKLRDE
RVPNSLWRPF VGKKTLGQVQ PYVLSDNALK TKIAILSSFY SYLMSEEFCE RNPAQIWLNH
SRFGQNKQYQ RQTDEDENSL AFTELQWSYV MSTVTQLAET SPELHQRSLF LISLIYSCYL
RISDVSARVG YAPVMGQFRQ NPQTGIWSFH IPLSKGGKKR SVAISKALLD GLVKYRQFLE
LSDFPNQGEH HPLFVRHRAA GRGRDAGLVN ANLGIRQIRE DIQTIINLAA DNAQTDGFGQ
DAEQMRKLTA HNIRHTGITH DININRRPLS HVQADAGHES IDTTSKYLHT TQIERHESAF
NKPLDHLQGI G
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