| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1867 |
|---|
| Symbol | |
|---|
| ID | 4252441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2221386 |
|---|
| End bp | 2222774 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638118478 |
|---|
| Product | sodium/sulphate symporter |
|---|
| Protein accession | YP_733998 |
|---|
| Protein GI | 113970205 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.970119 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.269593 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAGT TAAGTATTAA AAAATGGTTG ATCTTTAGCG CCATGCTCGT CGCCGTTTTG
TTGGCTATGT TTCCACTCAA GCAGCACCCG GCCCTTTTTT CCTACAGCGC ATCGGTCGTA
CTCATCACCC TGCTGTTTTG GAGCACAGGT TTTATTCCGC CCTTTATGGC GGGGCTGATC
TTTTTTGCCT TGGCCACCAT TTTTAAGCTG ATCGATCCCA GTGCGCTGTT CTCGGGATTC
GGTTCGGCGG CGGTGTGGTT AATTATCTCC GGCTTTGTGA TTGGCGGCGC CATTTCAGAG
TCGGGATTGA GTCGTCGCCT CGCCGCCCTT ATCGCCCCCG CGTTAACCAT GAGTTATCAG
CGCATGATTG CGGGACTCGT CATCAGCGCG ATGTTACTGG GATTTGTGAT GCCATCCTCC
GTGGGGCGCG CGGTTGTGAT GCTGCCCATC GGCATGGCCT TAGCAGAGCA GCTTGGGTTT
AGCCGTGGCA GCAATGGCAG AATAGGCATA GCTACCGCAC TGGCACTCGC CTGTAATATG
CCAAGCCTTG CGGTACTGCC CGCCAATATT CCCAATATGA TTTTGGCCGG TGCGAGCGAA
AATCTGTTTA ACGTGCATTT TGGCTATGCA GAATATCTGT TTCTGCATTT TCCGATTTTA
GGTCTGCTCA AATCGGCCAT CATAGTGGCG CTCGTGGTGT ATTTGTTTCC GGCCAAGATA
GATAAAACCC AGATGGCGGC AGCGACGGAT ATCGAAGCGT ATGATGTAGT CAAGCAAGTT
AAGCTCGGGG TGTTACTCGT CATCACCCTG TTATTTTGGA TAACTGACTC ATGGCATGGG
ATCAATCCTG CATGGGTGGG GCTAACGACC GCCATCATCC TTTTGCTGCC GAAATGGGGC
ATTATTGAGC CAAAGCGTTT TAATCAATCG GTTGATTTTT CAACGGTTAT CTTTGTTGCC
GCCGCACTCG GGCTAGGCGT TTTAGTCAAT CAATCGGGGC TTGGCAGCGA ACTCGGCCAA
GTATTCAGTC AATACCTTCC CCTGTCACAA GGTGGCTCTT TCCTCAACTT TATGTCCTTA
TCCCTGATAT CGACCTTAAC TGGATTAGTG GCAACCGTGC CTGGCGTACC TACGGTATTA
ACCCCAATGG CTGCCGACCT GGCGAATGCA ACAGGGTTTT ATCTCCCTGC GGTATTGATG
ACCCAAGTGA TCGGCTTTTC GACAGTGATT TTTCCCTATC AAGCGCCGCC GCTGATTTTG
GCGATGCAAC TGTCTCAGGA GTCCCTCGCC CATCTGCTGA AAGTCACCTT ACCCTTAGCG
CTGATCACCT TACTAGTGCT GATGCCGCTG GATTACCTCT GGTGGCAGTT ATTAGGCTGG
ATAAGCTAA
|
|---|
| Protein sequence | MGKLSIKKWL IFSAMLVAVL LAMFPLKQHP ALFSYSASVV LITLLFWSTG FIPPFMAGLI
FFALATIFKL IDPSALFSGF GSAAVWLIIS GFVIGGAISE SGLSRRLAAL IAPALTMSYQ
RMIAGLVISA MLLGFVMPSS VGRAVVMLPI GMALAEQLGF SRGSNGRIGI ATALALACNM
PSLAVLPANI PNMILAGASE NLFNVHFGYA EYLFLHFPIL GLLKSAIIVA LVVYLFPAKI
DKTQMAAATD IEAYDVVKQV KLGVLLVITL LFWITDSWHG INPAWVGLTT AIILLLPKWG
IIEPKRFNQS VDFSTVIFVA AALGLGVLVN QSGLGSELGQ VFSQYLPLSQ GGSFLNFMSL
SLISTLTGLV ATVPGVPTVL TPMAADLANA TGFYLPAVLM TQVIGFSTVI FPYQAPPLIL
AMQLSQESLA HLLKVTLPLA LITLLVLMPL DYLWWQLLGW IS
|
|---|
| |