Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1864 |
Symbol | |
ID | 4252438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2217673 |
End bp | 2218953 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638118475 |
Product | PqiA family integral membrane protein |
Protein accession | YP_733995 |
Protein GI | 113970202 |
COG category | [S] Function unknown |
COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
TIGRFAM ID | [TIGR00155] integral membrane protein, PqiA family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0424283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCACAGT GTGGTTCTTC ACCCCAGCAT GAGGGGATTT TACAGGCCTG TGAGGAATGT GGTTTAGTCA CGCCTTACAT TGAGCCCAAG CCAGGTTATC GTGCCCATTG TCCAAGATGT CAGCATAGTT TGCAGGCCGC ATTAGCCACA CCCTTTCAGC CGATTTGGGC CTATGGGATC GCGACCTTAA TGATGTTGGG ATTGAGTCTG GGGTTCCCTT TCTTATCCTT CAGTGTGCAG GGCTTATCAC AACAAGCCAG CTTATGGTCT GCATTGATCA GTATGCATTA TGCCAGTAAT AATTTGTTGG CCATGCTCAT CTTGTTGTGT GTGGTGATTT TGCCGTTGAT TTATATCAGT TTTTCAATGT TCATTTATAG GCAAGCCTAC TTAGTACAGC AAGGAAAAAC CATTGAGCTT AGCTGGCTTA AACGTTGGAG CAAGCGGGTA TTTAAATTTG AGTCTTGGCT GATGGCAGAT GTGTTCCTCG TCGGGATCTT AGTTGCTATG GTGAAAATCC TGTCACTGGC TGAGGTCGGC TTTGGCCCTT CGTTCTGGGC ATTTTGTGTT TATACCTTGT TATTAGTGAA GTTTGTTAGC CTAGTCGATA GCTCTTGGGT ATGGGATAAA TTAACTCCCA GAGTCGTGAC ACCCTATGTG AGGGCGGGTG AGTCGCACTT GCAACATAAT CATGCAGTGT GTGCTATCTG TGGCCAGTTA AATGCCATCG ATACATCTGA ATGTGGCCGT TGCTCTGGGC CATTACATAA ATACTTACCC GTATCCAGTA TGCAGGCCGC ATGGGCATTT TTGCTTGCGG CGGTCGTGTT TTATATTCCA GCAAACTTTT ATCCCATCAT GTACACCACC AGCGTGGGGC AAACGGAGGC ATCAACCATT ATCAGTGGTG TAGTGCTGTT ATGGCATATG GGATCCTATC CTGTGGCTTC GATTATCTTC TTTGCCAGCA TAGTGATCCC CACGGCAAAA ATCGCCTCTT TGGCTTACTT ATTCCACCAA GCAGGCAACC CCCATTCACC TGAGCAAACC ATTAAAAATC AACAACTTTA CCGAGTGACT GAATTCATTG GTCGTTGGTC TATGATTGAT ATTTTTGTGG TGGCTTTATT GACTGCATTG GTGCAACTCA ATGAATTAAT GGCGATTAAA CCCGGCCCCG CGGCATTGTC TTTTGCCATG GTCGTGATCT TAACCATGCT GTCAGCCATG AGCTTTGATT CTCGAGTTCT GTGGCGGCAA ACCTTCAGCA CAAATCGATA G
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Protein sequence | MSQCGSSPQH EGILQACEEC GLVTPYIEPK PGYRAHCPRC QHSLQAALAT PFQPIWAYGI ATLMMLGLSL GFPFLSFSVQ GLSQQASLWS ALISMHYASN NLLAMLILLC VVILPLIYIS FSMFIYRQAY LVQQGKTIEL SWLKRWSKRV FKFESWLMAD VFLVGILVAM VKILSLAEVG FGPSFWAFCV YTLLLVKFVS LVDSSWVWDK LTPRVVTPYV RAGESHLQHN HAVCAICGQL NAIDTSECGR CSGPLHKYLP VSSMQAAWAF LLAAVVFYIP ANFYPIMYTT SVGQTEASTI ISGVVLLWHM GSYPVASIIF FASIVIPTAK IASLAYLFHQ AGNPHSPEQT IKNQQLYRVT EFIGRWSMID IFVVALLTAL VQLNELMAIK PGPAALSFAM VVILTMLSAM SFDSRVLWRQ TFSTNR
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