Gene Shewmr4_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1848 
Symbol 
ID4252422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2197652 
End bp2198305 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content37% 
IMG OID638118459 
Producthypothetical protein 
Protein accessionYP_733979 
Protein GI113970186 
COG category[S] Function unknown 
COG ID[COG4859] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.230254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000117045 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCTCACA CCTTAATTGG GCGTTATGGA GATATCGTGA GTAAAACTTG GTCATTGGAA 
GATGTTACTA TTATCGGTAA GGGGGCTCCA TACACTTTTT ATTTACCTTC AAGTTCGGTG
ATCAAGCAAC TGAAAGAAGG AAATATTGTA AAGCTAATGT TTAACTGTGG CGTTGAAAAT
GAGCATGGTT GGACGGCTGA AAGGATGTGG GTAATTATTA CTGAAGCTAA CAATGGTTGC
TATAAAGGTA CCTTGGACAA TGACCCAAGT TACATACCAG ATATTAAATA TCAGGATCTA
GTTGAGTTTG AAGCTAAGCA CATAATGCAA ACCGACATAG AAGAAACTGA AGAAGATATT
GTCGAAAAGT ACCTACCCAG ATGTTATGTA ACTTCGCAAG TATTAAAAGA TGGGTTACCC
GTTGGTCAAT TGTATCGCGA GCACCCATCA GAAGAGGAAG AGAATTATAG TGGCTGGACT
TTATTTTCTG GTTTAGAAAC TGAAGAGTAC CTAAAAAATG GTGAAAATTG GAATTACGTA
TCTCTAGGTG CAGTTTTAAA CCAATGTGAT AGGTTTATTT CATTACTAGA TATAGAAGAC
TATGAGCATG AGTATTCATG GGATAACTCC ATATCTGCGT TTATCAAAAT ATAA
 
Protein sequence
MPHTLIGRYG DIVSKTWSLE DVTIIGKGAP YTFYLPSSSV IKQLKEGNIV KLMFNCGVEN 
EHGWTAERMW VIITEANNGC YKGTLDNDPS YIPDIKYQDL VEFEAKHIMQ TDIEETEEDI
VEKYLPRCYV TSQVLKDGLP VGQLYREHPS EEEENYSGWT LFSGLETEEY LKNGENWNYV
SLGAVLNQCD RFISLLDIED YEHEYSWDNS ISAFIKI