Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1848 |
Symbol | |
ID | 4252422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2197652 |
End bp | 2198305 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638118459 |
Product | hypothetical protein |
Protein accession | YP_733979 |
Protein GI | 113970186 |
COG category | [S] Function unknown |
COG ID | [COG4859] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.230254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000117045 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCTCACA CCTTAATTGG GCGTTATGGA GATATCGTGA GTAAAACTTG GTCATTGGAA GATGTTACTA TTATCGGTAA GGGGGCTCCA TACACTTTTT ATTTACCTTC AAGTTCGGTG ATCAAGCAAC TGAAAGAAGG AAATATTGTA AAGCTAATGT TTAACTGTGG CGTTGAAAAT GAGCATGGTT GGACGGCTGA AAGGATGTGG GTAATTATTA CTGAAGCTAA CAATGGTTGC TATAAAGGTA CCTTGGACAA TGACCCAAGT TACATACCAG ATATTAAATA TCAGGATCTA GTTGAGTTTG AAGCTAAGCA CATAATGCAA ACCGACATAG AAGAAACTGA AGAAGATATT GTCGAAAAGT ACCTACCCAG ATGTTATGTA ACTTCGCAAG TATTAAAAGA TGGGTTACCC GTTGGTCAAT TGTATCGCGA GCACCCATCA GAAGAGGAAG AGAATTATAG TGGCTGGACT TTATTTTCTG GTTTAGAAAC TGAAGAGTAC CTAAAAAATG GTGAAAATTG GAATTACGTA TCTCTAGGTG CAGTTTTAAA CCAATGTGAT AGGTTTATTT CATTACTAGA TATAGAAGAC TATGAGCATG AGTATTCATG GGATAACTCC ATATCTGCGT TTATCAAAAT ATAA
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Protein sequence | MPHTLIGRYG DIVSKTWSLE DVTIIGKGAP YTFYLPSSSV IKQLKEGNIV KLMFNCGVEN EHGWTAERMW VIITEANNGC YKGTLDNDPS YIPDIKYQDL VEFEAKHIMQ TDIEETEEDI VEKYLPRCYV TSQVLKDGLP VGQLYREHPS EEEENYSGWT LFSGLETEEY LKNGENWNYV SLGAVLNQCD RFISLLDIED YEHEYSWDNS ISAFIKI
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