| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1773 |
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| Symbol | |
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| ID | 4252347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2098997 |
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| End bp | 2101117 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638118384 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_733904 |
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| Protein GI | 113970111 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACA GCACCGAACT GACTCCCCCA AAAGTATCAA CCCTATGGGT TGACGCTGGC
GCACTCAGAC TCAAGGCGCC GCTCACAGAG CTACTCAAAT ACTGGGAAAA GGAGCGGCTG
ATCACCCCGC TGGATCGCCA TTTTGCCCTC GAGATGGCAA GGCTTCACCC TAATGATGCT
CAAGAGCCGC TGTTTATGCT GCTTTGCGCC TTGTTAAGCC AACAGCTCTC GGCCCAACAT
ACTTGCCTAG TGCTCGAACA TATAGTGCCA GCCAATCCGC TGGCGGAGCC GGTTAATCAC
TGCCAGATCC GTTTGAGCCT GCCAGAACTG ATTGCAAGGC TAGAAAATTT TGAAGCGGTT
GGTGAACCTC ACAGCAATAA GCCACTGATT CTTGATGGCG GCCGACTCTA TCTTGAGCGT
TATCATCATT TCGAAACCGA GGTTGCCAGT GCCCTGACGA GGCTCTCTTC GAGTCAACCC
GTCAACAACA CGGATAAAGA TTCAGACGCG CCGCTACGCA GGCAGCTCGA TTACTTATTT
CCAAACGCCG CATCTTCCCA TGCAACCTCA GCCCTTGAGC CTCATATCGA CTGGCAAAAG
GTCGCGACGG CAACGGCGCT CGGCAAAAAG CTGGCGGTGA TCACCGGCGG CCCGGGTACG
GGCAAAACCA CCACAGTAAC TAAATTACTG TTGTTACAGC AATTAGACTC ACCAAAACAG
ATAAGACTCG TCGCCCCGAC AGGCAAGGCC GCCGCCCGAT TAAGTGAATC GATAAAGGCC
TCGAAAGCAA GACTCGAGCA GGAGCTCAAA CAGGCTCAAG CGACAAACGA ACAAGTACAC
AGTCACGCAA CCCAAGCACT GTTAGCCGCG CTCAAGCAAG TGCCGGAAGA GGCATCAACC
TTACATCGTC TGCTGGGGGT TATCCCCAAT TCGGCGCAGT TTCGTCACCA TCAAGGCAAT
CCCCTGCGGC TAGATCTATT GATTGTCGAT GAAGCGTCGA TGGTCGATTT GCCTATGATG
TATAAGCTGC TCACGGCCCT TCCCGCACAG GCGGGTTTGA TACTGCTTGG GGATCAGGAC
CAACTCGCCT CGGTAGAAGC AGGCGCCGTG CTCGCCGATA TTTGCGCAGG GCTAAAATAC
GAGTCGGAAC AACACTCTGA ATGGAGAATG CGTTATAGCC AAGTTCAGGC CGAGCAATTG
AGCAAGCTCA CCGGCTTTGA TCTGCTTCCC TATATTCATC GCGAGCCAAA AATTGGTGAC
AGTTTGTGTA TGTTGACCCA CAGCCACAGA TTTAAAGGCG ATGCCGGCAT TGGCCTATTA
GCCAGCGCGG TGAACCGCTC CGATCTCGCG GGGATTTTGG CCGTATGGCA ACGGGGACTA
GCCGAGCTTA CTTGGCTAGA ACACGGTATG GATCAGAACC AGACCCAAGC CAAAATCAGC
GAGCCTGCAA ACAACACTGG CCTTCACGCC CTGCTAACAC AGGCCTGTGA GCAATACGCC
GAGTATTTAC GTCCGCTACA AGTTTCAGAT CCAAGCCCTG TACCAAGCAC CATCGAAGCC
ATTGCCCACT TTAACCAGTA TCGCATCCTA TGCGCCATGC GCAGTGGCGA TTATGGTGTC
GAAGGTATCA ATCAAGCCGT GACTAAAGCG CTGTCTCAGG CCAAGCTTAT CCATCCTCAG
CAAGAGTTTT ACCTTGGCCG GCCAATTATT ATCCAAAGCA ACGACTATAA CTTAGGCCTG
TTTAACGGTG ATATTGGTTT GATTTTACAG GATGAAGACA GGCCAGAGCG CCTGATGGCC
CACTTTATCA AAGCCGATGG CAAACTGCTT AAAGTGCTCC CCGCAAGGCT GCCTAGCCAT
GAAACCTGCT ACGCCATGAC GGTACATAAA AGTCAGGGCA GTGAATTTAA TCGAGTCGCC
CTTGTACTTC CGCCCAATCC GAGCCTAGTA CAATGGCAAT TGCTCACCAA GGAGCTGGTC
TACACCGCTA TTACCCGTGC AAAACAACAC TTTAGCTGTT TAGGCACACA ACAAGTCTTT
GAGCGCGCAA GCCAGCAAGC TACCCAGCGA GCCTCAGGTT TAGCCGATAG GCTCTGGCGC
GGTAACGCGA TGACTGATTA A
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| Protein sequence | MNHSTELTPP KVSTLWVDAG ALRLKAPLTE LLKYWEKERL ITPLDRHFAL EMARLHPNDA
QEPLFMLLCA LLSQQLSAQH TCLVLEHIVP ANPLAEPVNH CQIRLSLPEL IARLENFEAV
GEPHSNKPLI LDGGRLYLER YHHFETEVAS ALTRLSSSQP VNNTDKDSDA PLRRQLDYLF
PNAASSHATS ALEPHIDWQK VATATALGKK LAVITGGPGT GKTTTVTKLL LLQQLDSPKQ
IRLVAPTGKA AARLSESIKA SKARLEQELK QAQATNEQVH SHATQALLAA LKQVPEEAST
LHRLLGVIPN SAQFRHHQGN PLRLDLLIVD EASMVDLPMM YKLLTALPAQ AGLILLGDQD
QLASVEAGAV LADICAGLKY ESEQHSEWRM RYSQVQAEQL SKLTGFDLLP YIHREPKIGD
SLCMLTHSHR FKGDAGIGLL ASAVNRSDLA GILAVWQRGL AELTWLEHGM DQNQTQAKIS
EPANNTGLHA LLTQACEQYA EYLRPLQVSD PSPVPSTIEA IAHFNQYRIL CAMRSGDYGV
EGINQAVTKA LSQAKLIHPQ QEFYLGRPII IQSNDYNLGL FNGDIGLILQ DEDRPERLMA
HFIKADGKLL KVLPARLPSH ETCYAMTVHK SQGSEFNRVA LVLPPNPSLV QWQLLTKELV
YTAITRAKQH FSCLGTQQVF ERASQQATQR ASGLADRLWR GNAMTD
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