| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1771 |
|---|
| Symbol | |
|---|
| ID | 4252345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2098106 |
|---|
| End bp | 2098468 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638118382 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_733902 |
|---|
| Protein GI | 113970109 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4106] Trans-aconitate methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.852905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGGCAC AAGCACAGGA TCACAATCAA GTCACAGTGG CGACCTTTGA TAAATATGCC
AAACAGTATC AGGACAAATA CTTGGAATTT GCCCCATACA CTCAAACCTA TGAAAGCCTC
CTCGGCTATC TCACCGAACA TAGCCGCCTA CTGGATATCA GTTGTGGACC AGGCAATATC
AGTCGCTATT TAGTCGCGAA GGAACCTAGA TTAACGGTCT TTGGTATCGA CCTCGCTCCG
CAAATGATTG CACTCGCGAA ACAAAATATC CCCTCGGGCC ATTTTGAAGT CGCAGCTGGC
CTTGCCGATG TCGGAAATGG TGTCAGCCAG TTTGTGGCCA TGGTTGAGCA GCTTAGACCC
TAA
|
|---|
| Protein sequence | MKAQAQDHNQ VTVATFDKYA KQYQDKYLEF APYTQTYESL LGYLTEHSRL LDISCGPGNI
SRYLVAKEPR LTVFGIDLAP QMIALAKQNI PSGHFEVAAG LADVGNGVSQ FVAMVEQLRP
|
|---|
| |