Gene Shewmr4_1708 details

Gene Information

• Locus tag: Shewmr4_1708
• ID: 4252283
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-4
• Kingdom: Bacteria
• Replicon accession: NC_008321
• Strand: +
• Start bp: 2019364
• End bp: 2022837
• Gene Length: 3474 bp
• Protein Length: 1157 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 638118320
• Product: hypothetical protein
• Protein accession: YP_733840
• Protein GI: 113970047

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.0961451
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTAAACC GCGATATATA TCAGTTAGAC CCACTGGAAA GCAAACTTGC CAACAACGGC 
GTGGCCGAAG TAAAAGACGA CCTGTCTCAA GGCGCGCTCG AAACACTCGA GTATGAGCTT 
CGCACTTTTG TGTGTAGTGG TGCTTATGCC AAAGGGCTAG ACGATATTCT CAGTACATTT 
CTACGTAACG TAAAAAGCAG CGGTGAACAG CCAGGGGTAT GGATCTCAGG CTTCTTCGGT 
TCTGGTAAGT CACACCTGGC TAAAATGCTC AGAACGCTAT GGACCAATCA AAAAATAAAT 
GATGGCACCG ATGCGCGCTC ACTGGTTGAT TTGCCGGACA CTATAAGTCA TCACTTTGAC 
GAACTCTCAA CATTAGGCGC CAAATTGGGT GGTTTACATG CCGCCTCCGG CACCTTAGGT 
GCGGGTGCTG ATGATAAGGT GCGTTTGGCG TTATTGGCGG TTATTTTCAA ATCGGTCAGA 
TTATCAGAGC AATACCACCT GGCAAGATTT GAACTTTGGC TTAAGGCCGA AGGTATTCTG 
GCGCAGGTAA AGGCCTATAT CGAGCAGCAC GCCAAAGGTA AAGAAGGCGA AGATTTGTGG 
CAAAAAGAGC TGCGTAACCT TCACGTCTCG CCTGTGATGG CGAAGGCGTT ACTGCATGCC 
ATGCCATCTT TTGGCAGCGA TGATAAAGAA GTGCGCGATA TGCTGCGTGC CCAGTACAAG 
ATTGTCGAGG ATGTTTCAAA CACTGAAATG GTGCAGGCGA TAGTCGATGC CTTAGCCCCA 
CATGGTGAAA TGCCATTAAC CCTAATCGTG CTCGATGAGG TGCAGCAATA CATTGCCGAC 
GACCCAGATA AAGCTTATTT GGTGCAAGAG GCCATCGAAA CCTGCTGTAA AGCGGGTGTC 
TTCAAGTCGC GCTTGTTGTT TGTTGCTACC GGGCAAAGTG CCTTATCTGG CTTGCAAAAC 
CTGCAGCGTC TGATGGGTCG CTTCCAGGTA TCGGTCCAAC TGGAAGACAC CGATGTTGAT 
GCCGTTATTC GCAAAGTGAT CCTGCAGAAA AAGGAAACCG CCAGAGTCAG TATTGAGAGT 
GTGATTCAAG AAAACTTGGG TGAAATCAAC CGCCATCTGC GCGGTTCTGT TATTGAATCC 
AATAAAGATG ATGAGCAGTG GATGGTCGCC GACTATCCTC TGCTGCCAGT ACGTCGCCGC 
TTTTGGGAGC GGGTATTACC AGCGCTAGAC AAAACCGGTA CTGGCTCACA GCTACGTAAC 
CAGCTTCGAG TCGTACACGA GGCAACTAAG TTAACAGCAC TTAAACCCTT GGGCAGTGTG 
GTGCCAGCCG ATTTTATCTA CGATCAAATT GCCATTAATC TGCTGCAAAC TGGCGTGATT 
GGCAAAGACA TCTACGAAAA AATAGGCCGC TTAAAAGCCG GTAATGACGA TGAGCAGTTG 
CAAGGGCGTC TGCTGTCATT GATCTTGCTT ATGAGCAAGT TGCCAGCCGA TATCAACCAT 
GGTATCGCCT CAACGGAAGC TTTTTTGGCA GACTTGCTGC TTGAACATTT AAGTGAAGGT 
AAGCACGAAC TTCGTGCCCG GCTGCCAGGC TTACTCAGCC AGCTGGTGGA AGAGGGCGCA 
TTACTGCCGA TGAACAGCGC TGCTGGCGTT GAATATCGCC TGCAAACCGT CGAGAGTCAG 
AAATGGCATG ACACCTTCAA GCAGCAGCAA AACGACCTGC GTGGTAACCC ACAGTCGCTT 
GAGACTTTCC GCAGTCAGGA AATTCAGCAT TATATTCGCA GACAATTGGC AGCAGCCAAA 
GTTAACCAGG GGACAGTGGC TGAAGGCCGT ACTATCAATT TGTGTTTCGA TGCGGATCTC 
CCAGCCGATG CCAATAAGCG ACTGTATGCC CATGTGCTGG AATGCAGCGA GCGCCAATTT 
ACCGATGCAG TGAGACGTGC CAGCGCCGAC AATGCCACCT TATTTGTCCA TGTGCCCAGC 
ATTCGCCGCT CTGATCTATT AAGTGCCATT GTGGATTTTA AAGCCGCGGA GACCACCTTA 
GATGTGAGTG GCCTGCCAGC CACGGATGCT GGTAAAGATG CTAAAGCCGC CATGGAGCAT 
CGTAAATATG AGGCCGAACG CACCAAAAAG CTTATTTTGA AAGAGATTTT TGACGGCATT 
ATGGTGCAAT TAGCCGGCGG CTCAGAGGTC ATGGGGGAGA CCCTTACCGA ACAGTTTGAA 
AATGGCGGTA AAAAGGCCTG CGAGCGCCTT TACAACGAAT TCAAACTGGT TGATGTCAAA 
GGTTGGGGTA CAGTGTACGA CCGTGCCAGT AAGTCGGCCG ATGCCAATGC TCTTGCTGCC 
ATTGGCTTTA ATGACGAAGC CGACAAACAC CCCGTGTGCA TGGCCATTAA GCGCTTTATC 
GGTGTGATGA AAACCGGTGC CGAAATCCGC GATAACTTCC AAAATGCCCC TTATGGTTGG 
CCTAAAGACA CTATCGACGG CGCCCTGTAC GCCATGTTGG CTTCTGGGGT ATTAAAGGCG 
ACCGATGGCC AAGAAAAACC GCTCGATGCC AAAAGCCTTG AGCGCGCCAA AGTCGGCCAA 
ACTAAATTCC GCCCCGAAAC AGTCAGCCTA AGTACGGTGC AAATCCTCAA GGTGCGCAGT 
TTGATCAATG CCATTGGGGT GAGTTGTACT AACGGTGAAG AACAGTCCAA GCTAAGCCAG 
GCGATAGCCC AGGCTAAGCA AATTGCCCGT AAGGCCGGTG GCGATGCGCC ACTGCCACTG 
CCGCCAGCAA CCCCGCACTT GAATGAGATT GAAGTCTTGT CAGGCAATGC GCAATTGCTT 
GCCGCCTACC AATCACAGCC CATTATTCTG CAAGAGTTGG AACAATGGAA AGCGCAGGCA 
GATAAAGTCA GTGCTCGTCT TTACCTATGG GACGAGTTCA AGGCTGCACT CAAGCACTGT 
CAAGGGTTAG CGGGATACGA TGCCCTTGAT AGTGAAAAAC GTGCCATCGA GCAAAATCGC 
AGTCTCTTGG CTGAGCCTAA CCCCATAGAA CCACTGCTAA AACAGGCCAT TGAAGCGATT 
CGCCTAGCCA TCATGAAGAA GTATCAAGAC TTCCAGGATG AATATCAAAC CTGCCTGCAA 
GAGCTTGAGC AAGACGCCAT TTGGGCGCAG CTTTCAAGCT CTCAGCAAAG CGAGCTGTTA 
ACCAAGCACC ATTTGGATAA CCTCGAGATG CAGCCGCTTT CCGGCAACGA CAGAGTGATC 
GACAGCATCG AAAACACCTC GCTCACCCAA TGGAGCGATA AAACCTCCGC CTTGGCTGGC 
CGCTTTAGTC GAGTACGGCA AGAGGCGGTA GACAGGTTAG TGCCAAAGGC CAAGCAGGTG 
CAGCTGTCCA AGGTGGTGAT TAACACCGAA GCTGAGCTCG ATGCCTGGCT TAAGCAGGTG 
CGGGCCGATG TCATGGCGGC GCTTAACGAT AATCGCCCAG CGTCGTTAAA GTAG 

 

Protein sequence

MLNRDIYQLD PLESKLANNG VAEVKDDLSQ GALETLEYEL RTFVCSGAYA KGLDDILSTF 
LRNVKSSGEQ PGVWISGFFG SGKSHLAKML RTLWTNQKIN DGTDARSLVD LPDTISHHFD 
ELSTLGAKLG GLHAASGTLG AGADDKVRLA LLAVIFKSVR LSEQYHLARF ELWLKAEGIL 
AQVKAYIEQH AKGKEGEDLW QKELRNLHVS PVMAKALLHA MPSFGSDDKE VRDMLRAQYK 
IVEDVSNTEM VQAIVDALAP HGEMPLTLIV LDEVQQYIAD DPDKAYLVQE AIETCCKAGV 
FKSRLLFVAT GQSALSGLQN LQRLMGRFQV SVQLEDTDVD AVIRKVILQK KETARVSIES 
VIQENLGEIN RHLRGSVIES NKDDEQWMVA DYPLLPVRRR FWERVLPALD KTGTGSQLRN 
QLRVVHEATK LTALKPLGSV VPADFIYDQI AINLLQTGVI GKDIYEKIGR LKAGNDDEQL 
QGRLLSLILL MSKLPADINH GIASTEAFLA DLLLEHLSEG KHELRARLPG LLSQLVEEGA 
LLPMNSAAGV EYRLQTVESQ KWHDTFKQQQ NDLRGNPQSL ETFRSQEIQH YIRRQLAAAK 
VNQGTVAEGR TINLCFDADL PADANKRLYA HVLECSERQF TDAVRRASAD NATLFVHVPS 
IRRSDLLSAI VDFKAAETTL DVSGLPATDA GKDAKAAMEH RKYEAERTKK LILKEIFDGI 
MVQLAGGSEV MGETLTEQFE NGGKKACERL YNEFKLVDVK GWGTVYDRAS KSADANALAA 
IGFNDEADKH PVCMAIKRFI GVMKTGAEIR DNFQNAPYGW PKDTIDGALY AMLASGVLKA 
TDGQEKPLDA KSLERAKVGQ TKFRPETVSL STVQILKVRS LINAIGVSCT NGEEQSKLSQ 
AIAQAKQIAR KAGGDAPLPL PPATPHLNEI EVLSGNAQLL AAYQSQPIIL QELEQWKAQA 
DKVSARLYLW DEFKAALKHC QGLAGYDALD SEKRAIEQNR SLLAEPNPIE PLLKQAIEAI 
RLAIMKKYQD FQDEYQTCLQ ELEQDAIWAQ LSSSQQSELL TKHHLDNLEM QPLSGNDRVI 
DSIENTSLTQ WSDKTSALAG RFSRVRQEAV DRLVPKAKQV QLSKVVINTE AELDAWLKQV 
RADVMAALND NRPASLK