Gene Shewmr4_1693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1693 
Symbol 
ID4252268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2007095 
End bp2007817 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content50% 
IMG OID638118305 
Productretinol acyltransferase domain-containing protein 
Protein accessionYP_733825 
Protein GI113970032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.36742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0247076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACAT TTCAACCCGG TGATCATCTG GTCACCAATA TCGATCCGCT TGGCTTAACC 
GAACACCATG GCCTCTATGT CGGCCATGGA AATGTGATTC ACTTATCTAA ACAGGGCATC
ATCGAAGAAA TCGATCTGCT GCAATTTGCC AGTGGCCATA AGATCAGAGT GAAAAAGTCC
AGCCTGTTTC CCCATCAGGC CATTGAACTT GCACGCAGTC AACTGGGTCA TAGCCCATAC
GGCGTAGCTA CCAACAATTG CGAGCACTTC GTCAATGAAT GCTTAGCGGG GAGCAGTACC
TCTAATCAAG TCAGTAATCT CACCCACATG GCGCTGCAAG GCTCAGCCAG AGCAGGTTTA
CTAGGGAGGA GCGCGTCAAA GCTTGCCACG GGGACTGTCG CAAACGTCGT ATTAGCCTCT
ACCGTCATCA AAATGACCGG TGAATACCTA GGGTTACCCG ATAACGTCAA CACGCTGCTA
GGTACACCTG GAGATCTTGT GGCTAAACCT GCCGAATGCC TACTAAAAGG CACCACGCAA
ACTCTAGATG AAACTTATAC TTGCTTACGC CAAGGAGAGA TGACCTATGC GGGGATCAAA
CTCGTCACCG GCAGTATAGA AACGGGCTTA AACACCGTGT TGACGACAGC AGAAGTGGGC
ATCAATGGTG TAAAAGCCGG TGCGGGGCTG ATAGCCGATG CATGGCATTG GTTAAGGTCA
TGA
 
Protein sequence
MYTFQPGDHL VTNIDPLGLT EHHGLYVGHG NVIHLSKQGI IEEIDLLQFA SGHKIRVKKS 
SLFPHQAIEL ARSQLGHSPY GVATNNCEHF VNECLAGSST SNQVSNLTHM ALQGSARAGL
LGRSASKLAT GTVANVVLAS TVIKMTGEYL GLPDNVNTLL GTPGDLVAKP AECLLKGTTQ
TLDETYTCLR QGEMTYAGIK LVTGSIETGL NTVLTTAEVG INGVKAGAGL IADAWHWLRS