Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1662 |
Symbol | |
ID | 4252238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1962170 |
End bp | 1963126 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118274 |
Product | DNA polymerase III, delta prime subunit |
Protein accession | YP_733795 |
Protein GI | 113970002 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0470] ATPase involved in DNA replication |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAACGC AAAGCGGATT TGATGTATTA ACCCTGCCTT GGCTCGATGC GCCAAGACAG GCGTTTTTAA CCCAGTTACA AACTCAAAAA GTCCCCCACG CGCAACTCGT GGGTATCGAT TCCGCCTATG GCGGTGAACT CTTGAGTGTG TTTATGGCGC GCGCCGCCAT GTGCTCACAA CCCACTCCCA CTGGCGGATG CGGTTTTTGT AAGTCCTGCC AGTTATTTGA TGCGGGTAAT CACCCTGATT TTTACCAAAT TGAGGCCGAT GGTCATCAAA TTAAAGTCGA CCAAATCCGT GAGCTGTGCA CCCGCCTGAG TGCAACCGCC CAGCAGAGTG GTCGGCGTGT CGCCATCATT CACCACAGCG AGCGCCTGAA CTCAGCCTCC GCCAATGCGT TACTCAAAAC GCTCGAAGAG CCGGGCAAAG ACACTTTACT GCTATTACAT TCCGATACGC CCGCGCGTTT AATGGCAACG ATCAGCAGTC GCTGCCAACG GCTTCCCTTT GTGGCGCCGT CTAAGATGTT GATCAAAAAT TGGTTAATTC AGCACTGTCA GATCCAAGAG GATGTGACTT GGTGTTTAAG TGTGGTTGGC GGCCCATTAA AGTTGGCCGA AAGTTTGCAA ACAGATGGGA CACAACCGAG TCGCTATCAA ACTTTGTTAG GTTTTCGCAA AGATTGGGTG CAAAGTTTGT CGTCAGGCCA TCTGTGTGCT AGTTTGTTAA CGATAAGTGA ACAACAAATC ATTGATGCTC TTAAGGTTTT ATACTTACTC CTGAGACAAA TTTTATTGAA GTACAGCGAC CAAGATGCGT TTGTGCAAGC GCAAATAGGG AACTTGGCGG CGAAAATCAT GGGAATGTGT CATAGCTTAA GTGCAATGCC GAGTGTCAAT TATTTAGGCT TGTGTCAAAG TTATGTCTTA GAATATAGAG AAATAACAAA TAAGTAA
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Protein sequence | MVTQSGFDVL TLPWLDAPRQ AFLTQLQTQK VPHAQLVGID SAYGGELLSV FMARAAMCSQ PTPTGGCGFC KSCQLFDAGN HPDFYQIEAD GHQIKVDQIR ELCTRLSATA QQSGRRVAII HHSERLNSAS ANALLKTLEE PGKDTLLLLH SDTPARLMAT ISSRCQRLPF VAPSKMLIKN WLIQHCQIQE DVTWCLSVVG GPLKLAESLQ TDGTQPSRYQ TLLGFRKDWV QSLSSGHLCA SLLTISEQQI IDALKVLYLL LRQILLKYSD QDAFVQAQIG NLAAKIMGMC HSLSAMPSVN YLGLCQSYVL EYREITNK
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