Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1639 |
Symbol | |
ID | 4252215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1942960 |
End bp | 1943367 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118251 |
Product | GreA/GreB family elongation factor |
Protein accession | YP_733772 |
Protein GI | 113969979 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0011881 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAACGC CAAATATTAT TATTTCAGAA ATCGATTTAG AAAGACTCGA GCGTCTGCTG GAGTCATTAC CTGCGAACGC CTTTCCGGGA CGCACGGCAT TGGAGGCGGA ACTCGACCGA GCAGACATTG TGCCCGCCGC GCAGATGCCT GGTAATGTGG TGACGATGAA TTCTGAAGTG AAATTTAGTG TGTCATCCAG CAACGACACC TTTTGTTTGC GTTTAGTTTA TCCTAAGGAT GCGACGGGTG AGGGCACCAT TTCCATCCTT GCGCCCGTGG GCAGTGCCTT ATTGGGCTTA TCCCAAGGGG ATGAAATCGA ATGGCCTGGC CCTGGTGGCA CTATGGTGAA GGTTCGTATC GAAGAAATTA TGTATCAGCC AGAGCGTAGC GGTGACTTTC ACCGTTAA
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Protein sequence | MKTPNIIISE IDLERLERLL ESLPANAFPG RTALEAELDR ADIVPAAQMP GNVVTMNSEV KFSVSSSNDT FCLRLVYPKD ATGEGTISIL APVGSALLGL SQGDEIEWPG PGGTMVKVRI EEIMYQPERS GDFHR
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