Gene Shewmr4_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1639 
Symbol 
ID4252215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1942960 
End bp1943367 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content50% 
IMG OID638118251 
ProductGreA/GreB family elongation factor 
Protein accessionYP_733772 
Protein GI113969979 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0011881 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAACGC CAAATATTAT TATTTCAGAA ATCGATTTAG AAAGACTCGA GCGTCTGCTG 
GAGTCATTAC CTGCGAACGC CTTTCCGGGA CGCACGGCAT TGGAGGCGGA ACTCGACCGA
GCAGACATTG TGCCCGCCGC GCAGATGCCT GGTAATGTGG TGACGATGAA TTCTGAAGTG
AAATTTAGTG TGTCATCCAG CAACGACACC TTTTGTTTGC GTTTAGTTTA TCCTAAGGAT
GCGACGGGTG AGGGCACCAT TTCCATCCTT GCGCCCGTGG GCAGTGCCTT ATTGGGCTTA
TCCCAAGGGG ATGAAATCGA ATGGCCTGGC CCTGGTGGCA CTATGGTGAA GGTTCGTATC
GAAGAAATTA TGTATCAGCC AGAGCGTAGC GGTGACTTTC ACCGTTAA
 
Protein sequence
MKTPNIIISE IDLERLERLL ESLPANAFPG RTALEAELDR ADIVPAAQMP GNVVTMNSEV 
KFSVSSSNDT FCLRLVYPKD ATGEGTISIL APVGSALLGL SQGDEIEWPG PGGTMVKVRI
EEIMYQPERS GDFHR