| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1578 |
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| Symbol | |
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| ID | 4252155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1862870 |
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| End bp | 1863565 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638118191 |
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| Product | prolyl 4-hydroxylase, alpha subunit |
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| Protein accession | YP_733712 |
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| Protein GI | 113969919 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.124056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTTTA TCGAAGTATA CCCTAATGCC ATACCCGATG ACCTGTGTGA TCGTCTCATT
CTTGCATTTG AACAACATTC AGGTGTGGTT GATGGTCAGA CGGGAAATGG TGTTGACCTC
GAAAAGAAGA TCAGCCGTGA TCTTACCTTA GATAATTTTG CCGATTTACA GCCACTCAAG
AATGAGTTGT TGTCCTACAC GCTTAAGGGC GCGGCGGATT ACTTTACTCA ATATGCTATG
GCGTTAATGG GCGCTGTATC TGTGTCGGTG AGTGACGAGC AAGGCCAAGC TGTGACGTTA
ACGCCGAACA ATTTTCAGCG CCTCGGTAAG CCCAGAGCCG AAGCCTTAGT CAAATATTTG
TATCGCAGCG GCAGTATTAA TATTCAAAAA TATCAAAAGA ATAAAGGTGG ATATCCCCAC
TGGCATTCGG AACAATTTCC CCAGCTCAAC CACAATGAGG CGTTGCATCG TGTCGTCTTG
TATATGTTCT ATCTCAATGA TGTGGAAGAG GGCGGAGAAA CTGAGTTTTA TTACCAGCAG
CGTAAAATTT CACCTAAGAA AGGCACTATG GTAATAGCCC CTGCGGGTTT TACTCACTCC
CATCGCGGCA ATATGCCTAT CAGTAATGAT AAATATATTG CCACTTCTTG GGTGATGTTT
AACCGCGCCG AGCAGTTGTA TGCGGTATAT GGTTAA
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| Protein sequence | MDFIEVYPNA IPDDLCDRLI LAFEQHSGVV DGQTGNGVDL EKKISRDLTL DNFADLQPLK
NELLSYTLKG AADYFTQYAM ALMGAVSVSV SDEQGQAVTL TPNNFQRLGK PRAEALVKYL
YRSGSINIQK YQKNKGGYPH WHSEQFPQLN HNEALHRVVL YMFYLNDVEE GGETEFYYQQ
RKISPKKGTM VIAPAGFTHS HRGNMPISND KYIATSWVMF NRAEQLYAVY G
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