| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1565 |
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| Symbol | |
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| ID | 4252143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1845297 |
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| End bp | 1847915 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118179 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_733700 |
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| Protein GI | 113969907 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.973248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGC GGCCTCTCAT TGAGCCTCAA GCACCGTTAA CCCAATGGCA AAAGAGCCTG
CCGTTTAAAC TCAGTCTGAT CCAACTGCTG ATCGCCAGCA TACTGATCTT TAGCACGGCT
TGGGTCATTC TCAACATACA GACCCAGCAA ATCAGCGAGC AACAAACCCT ACTCAATCAA
AACCATGGCC AGATTATCAT TGCCAAGTTG CAGGAAATGA CCTCCCAAGT GGAGAATCAG
GTCAATGCCA TCAGTCAAAT CGCCATGCTG TACCGTTACG AACCTGAGCA GCTCAGTAAA
AGCATTCCGG TATTACTTTC GATTGAAAAT CAAAAAGCGA TCATCTCTGG CGGCGGGATT
TGGCCCGAGC CAGGGGCATT TGATCGGCAA AAATTTCGCG ATAGCTTGTT CTGGTCACAC
AATATTCACG GCGAACTCGT CGCCATAAAC AGTTACAACG ATGACAGTTT TCCAAGCTAT
CACACCGAAG AATGGTATCG ACCGACCCGC TATTTTCCCG TCGGGAAAAT ATTTTGGTCT
AAATCCTATG TCGATCCCAC CACCCACGAA CCTATGGTGA CCGCATCGGG TGCCATGTGG
ATGGAACATC AATTTATTGG AGCTGCTACT ACAGATATCA GCCTAGAAAA ACTCAATCAG
CTCTTACGCA ATACCATGTT AGATGTCAGT GGCTACGTGA TAGCCCTAGA CCATCAAAAC
CAAATTTTAG CCTCGCCGAA TAGCGATAAT CTGCCGCAAT CGGCCCAAAA TCCTAACCAT
GCCCTACAGA CCTTCGACGA ACTGGCAAAA ACTGAGACGG CCTTTAGCCC GATAGCCTCG
GCACTGCACT TAGCCGACCG CAGTTTTATC GAACAAGCCG TGGCGGAGCG TGTGTTTACC
CAAGAGCAAA TGGATAACCT CACCCGCCTA AGCAACAACA GTGAGCGGGA GATGCTCTCA
GCCATAGTCA ATGACAATGC TAAAAACCAT TTTCTAACCC CAAGGCGGAT AGCTTCGGTG
TCATTAACTG TGGACCCTAT ACTCAAAGGC CCTTCGCTGG TGTCGGTATT TTTAATGCCC
CACACCTACT GGAAAATTCT CGTCGTCACA CCCATTGCAC CGTTACAGGA CACGGCAAAG
CAGCTTATCG AAAAAGTCGG TCTCTCCCTC GTGTTAATTC AGATGCTCGG CCTGATCCTG
CTCTTTTTGT TGCAACACAG ACTGCTCATC GCCCCCATTA TGGAAATGGT ACAGGCACTC
AAACGCAATG ATTCGGCCTC AATCGAATTA AAAGCCAAAG AGCGGCACGA TGAGGTTGGC
CTGCTGGCGA AAAGCTTTTT ATCCCGCACC CAGCAACTTG AAGTCGCCAT GGCCAGTCTA
GATGCCAGTA ATCTCGCACT CGAGCAGCAA TTACTGACCC AACAGCATTT TCAGCAGGAG
CTGAATCAGC GCAAGGAGCA ATTAAGATCA CTGCTCGACT TTTCATCCAC CATCATTTAC
ATCAAAGACT TAAATGGCAG ATATACCTTA GTCAACAACA AGTATTGTGA AGTTTTAGGG
ATTGAGCGGC GCAAAATCAT CGGCGCTACG GATTTTGATC TGTTCCAAAA CTCATTCGCC
CAGCTGTATC AGCAAAACGA TCAACGGGTC ACCCATAGCC AGGATGCGAT TCATTTTGAA
GAACCCATTC CATCCCTTAG GGGAGAGCTT ATTTATCAAA TGAGTAAGTT CGACATTCGG
GACGATGAGG ATAATTCCAT CGGAGTCGGC GCTATAGGGT TTAATGTGGA TCTCAAAAAA
CGCCAAGAAA AAGAACAGGA AAAACTGCTG CAATCGCAAT TAGCCCAGCT AAAAGATGAG
CAGCGCAAGA CCCTACTCTC GCAGCAAGAA AACAGCCAGC TCAGGGAACA ACTCGCGGCG
ATTCAAGCTG AGATCAATCA GCAAATCCAA CTCAACCTGA GCAAACAACA AAGTCAGAAA
CTGATGCAGA ATTTCCTAGC CGACGTCATG AGTCAAATGA TGCAAGAGCA GGACAAACTC
CTTGCACAGA TCTGCCAAGT GCGCACCAAG GAGGATGACA GCCACCAAGT CCAAGTCGTG
CAATTGATGA GCCAACAAGC GGCCAGACTC AGGCATATAT CGCAGCTGTT TACCGATCAA
CAAAGTGAGA TACGCCCACT GCATTTAGCC ATGTTTATCA ATCAATTACT AAGTTTATTA
CAGCCTCAAC TGCTAAAAAC TCAGGTTAAG GTCAAGCTAG AGTGCGATGA GCAATTAGTA
GTCGATGGCA ATGCTTGGCA ATATCTGCAA TTTTTCTATC GACTCATTAA CAACACTTTG
CACCATGCCT TTAAAGAGCA TAATCAAAAC AGAGCGTTAC AACTAACGCT CGAGAAAAAT
GGCGGTCAGT TGCATATGCG ACTTCAGGAC AATGGCGTAG GGATCCCAGC TTCGCACCTT
GAGCAACTCA AACAAGAAAT GCAGCAAAAC CAATGTATTG GCACACTGAC TTGCATTAAT
CTTTGGATAA AAGAAGAGTT AAATGGTGAG TTGAAGGTAG AGAGTGAGCT CAATCGCGGC
ACCCTAATCG AGTGCCACTG GCCATTACCT TCGGTATAG
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| Protein sequence | MDKRPLIEPQ APLTQWQKSL PFKLSLIQLL IASILIFSTA WVILNIQTQQ ISEQQTLLNQ
NHGQIIIAKL QEMTSQVENQ VNAISQIAML YRYEPEQLSK SIPVLLSIEN QKAIISGGGI
WPEPGAFDRQ KFRDSLFWSH NIHGELVAIN SYNDDSFPSY HTEEWYRPTR YFPVGKIFWS
KSYVDPTTHE PMVTASGAMW MEHQFIGAAT TDISLEKLNQ LLRNTMLDVS GYVIALDHQN
QILASPNSDN LPQSAQNPNH ALQTFDELAK TETAFSPIAS ALHLADRSFI EQAVAERVFT
QEQMDNLTRL SNNSEREMLS AIVNDNAKNH FLTPRRIASV SLTVDPILKG PSLVSVFLMP
HTYWKILVVT PIAPLQDTAK QLIEKVGLSL VLIQMLGLIL LFLLQHRLLI APIMEMVQAL
KRNDSASIEL KAKERHDEVG LLAKSFLSRT QQLEVAMASL DASNLALEQQ LLTQQHFQQE
LNQRKEQLRS LLDFSSTIIY IKDLNGRYTL VNNKYCEVLG IERRKIIGAT DFDLFQNSFA
QLYQQNDQRV THSQDAIHFE EPIPSLRGEL IYQMSKFDIR DDEDNSIGVG AIGFNVDLKK
RQEKEQEKLL QSQLAQLKDE QRKTLLSQQE NSQLREQLAA IQAEINQQIQ LNLSKQQSQK
LMQNFLADVM SQMMQEQDKL LAQICQVRTK EDDSHQVQVV QLMSQQAARL RHISQLFTDQ
QSEIRPLHLA MFINQLLSLL QPQLLKTQVK VKLECDEQLV VDGNAWQYLQ FFYRLINNTL
HHAFKEHNQN RALQLTLEKN GGQLHMRLQD NGVGIPASHL EQLKQEMQQN QCIGTLTCIN
LWIKEELNGE LKVESELNRG TLIECHWPLP SV
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