Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1551 |
Symbol | |
ID | 4252129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1831799 |
End bp | 1832344 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638118165 |
Product | hypothetical protein |
Protein accession | YP_733686 |
Protein GI | 113969893 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00662776 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTGGG CATTTATTGA CTATGAAAAC GTCGGTAATT TAGAAAAAAT CGACCTTTCT ATATACCAAA AAATAATCAT ATTCCTTGGA GCAAAGCAAC CCAAGATAGA TTTTGGTGAA AAAAAGTATG ACAAGCCACT TGAAATCATC GTTATTCAAC TGAAAGCAAC CCAGTCAAAT AATCTAGACT TTCATCTCTC ATATTATCTC GGATGTTATG AGAGCACAGC GAGTGAAAAC GTAACCTTCG ACATCATTTC AAACGATAAT GGTTTTGCTC CACTTATCGC ACATATAAAA GCAAATGGAC GTATCTGTAA GCATATTAAG CTTGCAACAG TAGAAAATAT CAGCGCAAAA TTACTGCATA GTTTAACTTC GAAGCCAAAA GAGAAACGCC CGAAAAAAGT TGACTCCTTA CGTAACCATA TCGCTTCTCA TATGGGGATT AAAGGTAATC AAATCGCAAT CCAAGGCTAC TTAAATCAAT TGATTAATGA CAAAGTGATT TCAGTGTCTG AAGATAAGGT AAGTTATCAC CGCTAA
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Protein sequence | MKWAFIDYEN VGNLEKIDLS IYQKIIIFLG AKQPKIDFGE KKYDKPLEII VIQLKATQSN NLDFHLSYYL GCYESTASEN VTFDIISNDN GFAPLIAHIK ANGRICKHIK LATVENISAK LLHSLTSKPK EKRPKKVDSL RNHIASHMGI KGNQIAIQGY LNQLINDKVI SVSEDKVSYH R
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