Gene Shewmr4_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1539 
Symbol 
ID4252117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1815079 
End bp1815363 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content43% 
IMG OID638118143 
Productheat shock protein DnaJ domain-containing protein 
Protein accessionYP_733674 
Protein GI113969881 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAACC ACTTTAGTGT GCTCGGTATC AAACCTAGCG CCAAAGAAGA CGACATTAAA 
AAAGCCTATC GCCGGCTCTC AAACAAATAC CATCCCGATA AGTTGTTAGG TGCCTCTGAT
GAAGAAAAAG AGCAAGCATC ACAACAACTT GAGCGCGTTA AAAAAGCTTA TGAAGTGCTC
TCAGATCCCA AGCTTAGAAA TGCGTTTATC CGAGACTTCA ACAATGTGAT CGTAACCGAT
CCCAATGGCG CCATGCGCGA ATTATGGGAT CAGTTTTACC CTTAA
 
Protein sequence
MINHFSVLGI KPSAKEDDIK KAYRRLSNKY HPDKLLGASD EEKEQASQQL ERVKKAYEVL 
SDPKLRNAFI RDFNNVIVTD PNGAMRELWD QFYP