Gene Shewmr4_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1523 
Symbol 
ID4252101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1796722 
End bp1797426 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content50% 
IMG OID638118127 
Producthypothetical protein 
Protein accessionYP_733658 
Protein GI113969865 
COG category[S] Function unknown 
COG ID[COG3110] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCC CCTCTATCCT GTGCGCATCC GCCATACTGC TTGCCAGCCT GCAACCCGTT 
AGTGCCGAAG TTCTCCTGCA GCTACCAAGT GATGTCGAGC TGTTAACCGT GAATGGACAA
AAGCCATTAA GCACCTCGCC AGTCACGTTG AGTGATGGAT TGAACCAAAT CGCGTTTCGC
TATAATGCCC AGTACCGCAA ACAGGCTAAT TCGATGCGCT ACCAATCGGA CGTACTGATC
ATCCGCTTTA ACGAAACCGA CCAAGCATTA CAGCTCAAAC TGCCCAATAT CGACTCGGCT
AAAGCCGCAA AGCAGTTCGA TGAGTCACCG TCACTCACGC TGTTAGATAA GCACAATCAA
GCGATTAGCT TTAACCAAGA CAGATTAGTG AAAAACGGGC TTCAGATAGG CCGAAACTTC
GAGCAGGAAA TCTTTCAATA TAATCAAGGC CAGCATCCCG CCTCGATAAG GCTTGCTGCG
CCTCAAGTAT CTGCAGCAGC GAGTGCACCA ACGCTGCCTA CTGCCACGTC TGCACCATCA
ACAGCCATAG CCACCAGTGC TGCCGCATCA ACAGCTGCAA TAACACAAGG CGAAGCGCCA
GACTCGCCGA CTCAAGCCGA AATCAGCCAT ATGCTGGATT ATTGGTATCA CCTCGCCGAT
GACGCCACCA AAGCAAAATT CAAGGCGAAA ATTAACGGGC AATAA
 
Protein sequence
MKSPSILCAS AILLASLQPV SAEVLLQLPS DVELLTVNGQ KPLSTSPVTL SDGLNQIAFR 
YNAQYRKQAN SMRYQSDVLI IRFNETDQAL QLKLPNIDSA KAAKQFDESP SLTLLDKHNQ
AISFNQDRLV KNGLQIGRNF EQEIFQYNQG QHPASIRLAA PQVSAAASAP TLPTATSAPS
TAIATSAAAS TAAITQGEAP DSPTQAEISH MLDYWYHLAD DATKAKFKAK INGQ