Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1523 |
Symbol | |
ID | 4252101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1796722 |
End bp | 1797426 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118127 |
Product | hypothetical protein |
Protein accession | YP_733658 |
Protein GI | 113969865 |
COG category | [S] Function unknown |
COG ID | [COG3110] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCC CCTCTATCCT GTGCGCATCC GCCATACTGC TTGCCAGCCT GCAACCCGTT AGTGCCGAAG TTCTCCTGCA GCTACCAAGT GATGTCGAGC TGTTAACCGT GAATGGACAA AAGCCATTAA GCACCTCGCC AGTCACGTTG AGTGATGGAT TGAACCAAAT CGCGTTTCGC TATAATGCCC AGTACCGCAA ACAGGCTAAT TCGATGCGCT ACCAATCGGA CGTACTGATC ATCCGCTTTA ACGAAACCGA CCAAGCATTA CAGCTCAAAC TGCCCAATAT CGACTCGGCT AAAGCCGCAA AGCAGTTCGA TGAGTCACCG TCACTCACGC TGTTAGATAA GCACAATCAA GCGATTAGCT TTAACCAAGA CAGATTAGTG AAAAACGGGC TTCAGATAGG CCGAAACTTC GAGCAGGAAA TCTTTCAATA TAATCAAGGC CAGCATCCCG CCTCGATAAG GCTTGCTGCG CCTCAAGTAT CTGCAGCAGC GAGTGCACCA ACGCTGCCTA CTGCCACGTC TGCACCATCA ACAGCCATAG CCACCAGTGC TGCCGCATCA ACAGCTGCAA TAACACAAGG CGAAGCGCCA GACTCGCCGA CTCAAGCCGA AATCAGCCAT ATGCTGGATT ATTGGTATCA CCTCGCCGAT GACGCCACCA AAGCAAAATT CAAGGCGAAA ATTAACGGGC AATAA
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Protein sequence | MKSPSILCAS AILLASLQPV SAEVLLQLPS DVELLTVNGQ KPLSTSPVTL SDGLNQIAFR YNAQYRKQAN SMRYQSDVLI IRFNETDQAL QLKLPNIDSA KAAKQFDESP SLTLLDKHNQ AISFNQDRLV KNGLQIGRNF EQEIFQYNQG QHPASIRLAA PQVSAAASAP TLPTATSAPS TAIATSAAAS TAAITQGEAP DSPTQAEISH MLDYWYHLAD DATKAKFKAK INGQ
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