Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1496 |
Symbol | |
ID | 4252074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1753821 |
End bp | 1755389 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118095 |
Product | hypothetical protein |
Protein accession | YP_733631 |
Protein GI | 113969838 |
COG category | [S] Function unknown |
COG ID | [COG1288] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0734371 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACTC CACCCTCGAC GACTCAGCCA ACAGAAGCAG CTCAGACTGC TATGGCACCA TCCGCTTCAC ACGCTCCTTC ATCCTTTCAA ATGCCCGATA CCTTAGTGAT CATCTTTTTT GTGGCATTAC TTGCGGGATT AATGACTTAC TTTATTCCGA TTGGGTCGTT TCAAACCCAA GAGGTGCATT ATCTGGCCGA AGGTGTCGAT AAAGCGCGGA CAGTAGTCGA CCCTAATTCA TTTGCCTATC AATTGGATGA TGCGGGCGAG CCTAAGTTAC AACCTGTGGC ACTGTTTAAA GGCGAGGGCG GGGTAGGCTT TTTTAACTTC GCCTTTGAGG GCTTAACCTC GGGGTATAAA TGGGGCAGCG CGATTGGCGT GATCATGTTT ATGCTAGTGA TTGGCGGCTC CTTTGGGGTG GTGATGGCAA CTGGCACCAT AGATAACGGC ATCTTAAAGT TAATCGATAA AACCCGTGGC AATGAAAAGT TATTCATTCC GGTGATATTT ACGCTGTTTT CCCTCGGCGG CGCCGTGTTT GGCATGGGGG AAGAGGCCAT TGCCTTCGCG ATTATCATCT GTCCACTCAT GATCCGTTTA GGGTACGACG GTATCACCAC TGTGATGGTG ACCTATGTGG CGACCCAAAT AGGTTTTGCC AGTTCTTGGA TGAATCCCTT CAGTGTGGCA ATTGCGCAGG GTATTGCGGG GATCCCGGTT CTTTCAGGCA GTGAGTTTCG CTTCCCTATG TGGCTTGGGT TCACATTGCT TGGCATCGTT TTTACCATGC GTTACGCCCA TCGCATTCAG CAGCAACCCA TTCTTTCCCA TAGCTATCAG TCCGATGCTT ATTTCCGTGA GCACCATGCT AATACAAAGC TCGAGAGCCG CTTTAATCTT GGGGATGTGT TGGTACTGTT GTTGTTAGTG TTAACTATGG TGTGGGTGAT TTGGGGCGTT GTGGCAAAGG CGTGGTTTAT CCCCGAGATC GCTAGCCAGT TTTTTACCAT GGGTATGGTG GCCGGCGTTA TTGGCTGCGT GTTTAAGCTC AATGGCTTAA CGCTTAACAA GGTTGCGCAG AGTTTTAAGG ATGGCGCTAA AACCATGTTA GAGCCAGCCC TTTTAGTGGG ATGCGCCTCG GGGATTTTAC TGCTCCTTGG CGGCGGTACA CCGACTGAAC CGAGTGTGCT TAATTCGATT CTGAACAGCG CTGGTGGGGT GATTGGCCAT CTGCCGGATG CGCTTTCGGC ATGGTTTATG TTGTTGTTTC AATCTGTATT CAACTTTTTC GTGACCTCAG GATCAGGGCA GGCCGCACTG ACTATGCCAC TGATGGCCCC TCTCTCTGAT ATCGTCGGTG TGACCCGCCA AGTGGCGGTA TTGGCCTTTC AGCTAGGCGA TGGCCTCACC AATATCATAG TGCCCACCTC AGCGTCTTTA ATGGCGACCC TTGGCGTATG CCGCGTCGAT TGGGGCAACT GGCTGAAATT TGTGTGGCGT TTTATGTTGC TGCTGATGTT GGTCTCAAGC GTACTGGTGA TTGGCGCGCA CTATCTTGGA TTTAACTAG
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Protein sequence | MTTPPSTTQP TEAAQTAMAP SASHAPSSFQ MPDTLVIIFF VALLAGLMTY FIPIGSFQTQ EVHYLAEGVD KARTVVDPNS FAYQLDDAGE PKLQPVALFK GEGGVGFFNF AFEGLTSGYK WGSAIGVIMF MLVIGGSFGV VMATGTIDNG ILKLIDKTRG NEKLFIPVIF TLFSLGGAVF GMGEEAIAFA IIICPLMIRL GYDGITTVMV TYVATQIGFA SSWMNPFSVA IAQGIAGIPV LSGSEFRFPM WLGFTLLGIV FTMRYAHRIQ QQPILSHSYQ SDAYFREHHA NTKLESRFNL GDVLVLLLLV LTMVWVIWGV VAKAWFIPEI ASQFFTMGMV AGVIGCVFKL NGLTLNKVAQ SFKDGAKTML EPALLVGCAS GILLLLGGGT PTEPSVLNSI LNSAGGVIGH LPDALSAWFM LLFQSVFNFF VTSGSGQAAL TMPLMAPLSD IVGVTRQVAV LAFQLGDGLT NIIVPTSASL MATLGVCRVD WGNWLKFVWR FMLLLMLVSS VLVIGAHYLG FN
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