| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1460 |
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| Symbol | trpD |
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| ID | 4252038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1708754 |
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| End bp | 1709797 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638118059 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_733595 |
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| Protein GI | 113969802 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAA CATCGATTCA GCCCCTGCTC GATATCTTGT TTCAGGGTAA GGCATTAACG
CGCGAGCAAA CCGCCAGTCT CTTTAGCACC CTTATTCAAG GTGAAATGAA TGAAGCCGTG
ATGGCAGGCA TGTTAATGGC CCTTAAAATT CGCGGTGAAA CCATTGCCGA AATCAGTGGC
GCCGCCGATG CGATGCGCGC CGCGGCAAAG CCTTTCCCTT ATCCCTCATC TATGCGGACT
GAAGGGATTA TCGATATCGT CGGCACGGGT GGCGATGGTT TTAATACCAT TAATATCTCC
ACCACAGCTG CCTTTGTCGC CGCAGCCGCT GGTGCAAAAG TGGCGAAACA CGGTAATCGC
TCCGTATCAA GCAAATCGGG CTCTTCGGAT TTACTCGCCC AATTTGGCAT TGATTTAACC
ATGTCACCCG AGCTGGCGAG CCGCTGCCTC GAATCACTCA ATCTGTGTTT CCTGTTTGCG
CCCCACTACC ATGGCGGTGT CAAACATGCG GTGCCCGTGC GCCAAGCGCT GAAAACTCGC
ACCATATTCA ATGTGTTAGG GCCATTGATT AACCCTGCAC GCCCAGAATT TATGCTGCTT
GGGGTCTATA GCCCAGAGCT GGTGACGCCC ATCGCCCGCG TACTGCAAGC CCTTGGCACG
CAAAGAGCCA TGGTGGTGCA CGGCAGTGGT TTAGATGAAG TGGCGCTCCA TGGCAGTACA
CAGGTCGCCG AACTCAAAGA TGGTGAGATT ATTGAATATC AATTAACGCC TGCGGATTTT
GGTGTGCCGC AGGCCCAAAT GAGTGAGCTT GAAGGGGGCG AACCTGCACA AAACGCCCAA
ATCACGCAAT CTATTTTGCA AGGACAAGGC AGCGATGCCC ACACCCATGC GGTTGCCATC
AATGCCGGTT GTGCCTTATA TCTGTGTGGC CTATCGGACT CAGTCAAAGC CGGCACCGCC
CTTGCGCTCA ACACCATAAA AAGCGGCAAA GCCTTTGAAT TACTGAATCA ACTCGCTAAA
GTCAGCAGCG AGGCACAGGA ATAA
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| Protein sequence | MSATSIQPLL DILFQGKALT REQTASLFST LIQGEMNEAV MAGMLMALKI RGETIAEISG
AADAMRAAAK PFPYPSSMRT EGIIDIVGTG GDGFNTINIS TTAAFVAAAA GAKVAKHGNR
SVSSKSGSSD LLAQFGIDLT MSPELASRCL ESLNLCFLFA PHYHGGVKHA VPVRQALKTR
TIFNVLGPLI NPARPEFMLL GVYSPELVTP IARVLQALGT QRAMVVHGSG LDEVALHGST
QVAELKDGEI IEYQLTPADF GVPQAQMSEL EGGEPAQNAQ ITQSILQGQG SDAHTHAVAI
NAGCALYLCG LSDSVKAGTA LALNTIKSGK AFELLNQLAK VSSEAQE
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