| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1445 |
|---|
| Symbol | |
|---|
| ID | 4252023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1691502 |
|---|
| End bp | 1692464 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638118044 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_733580 |
|---|
| Protein GI | 113969787 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.352294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGATA AAATCTTTAA ATATACAGGA CTCAGGCTTG AATTTTTCGA CAACATGCTA
ATGCGAGCGA GCCAGAAGTA TGCATTGAAT GATCCTTTTG AACTTAGACC GAGTCATAGA
AAAAGTAATA AAGCATTTGC TGATGAATAT TACTTTGATT ATGCAGTAGT TTCTTTATCT
GAGACGAATA ATAACTTATT GATGTGGTCT CATTATGCTG ACCAACACAA AGGAATGGTT
ATTGAATTTG ACATGACTCA GCCGTTATTC GATTCATATA AAACTTATAA AGCAACCATG
CCGGACCCTG ACGAGGAGTA TGACTGCGTT GATATTATAG ATGAAGAAGA AACAAAAAAG
CGTGAGGCAA TTAAATCAGG GCAAATACAA AGAGTGAGAT ACAACTCAAT GCGCCCGAGT
ATATATAATT TTGATAATGT ACTTGAGCAC TTTTTGGTTA AGAGTGAAGA GTGGATCTAT
GAGAAAGAAC ATCGTGTGAT ATTGCCATTA ATTACAGCAG ACAAAATCAT AGTTCACGAA
AAATACTTAC CTAAAATTGA GTTTACCCTT TACGATAGCA GCGAGCTTAA TAAGGTTCCA
TTAGATAATA ATATGTACCT AATCAATCTT AAAGAGGTTA CTGAGCGAGA TGGAAATCGA
TTTTTGAGTG GTTGGTATAG TTCTACTACT CCAGAGGAAG ACCTTAAGTA TGGTTTCATT
GAGTCGACAT ATTTGGAGTA TTTAAGAGAG ATCTCAGAGG ACCCAAGTAC AATCTTCCTC
TACCAAGTGC CACCTAAAGC AATAAAATCA ATTTTTCTTG GTTGTAGAGT CAGTTGTGAA
GATAGAAATG CTGTCATGGA GAAAATTCGG ACGTCTGACT CTTTGAATCA CATAGAAATA
TTTCAAGCTA CTCCTAGTAA TGAAAGATTC GAGCTTGAAT TTAAAAAGCT AACAAAAGCT
TAA
|
|---|
| Protein sequence | MLDKIFKYTG LRLEFFDNML MRASQKYALN DPFELRPSHR KSNKAFADEY YFDYAVVSLS
ETNNNLLMWS HYADQHKGMV IEFDMTQPLF DSYKTYKATM PDPDEEYDCV DIIDEEETKK
REAIKSGQIQ RVRYNSMRPS IYNFDNVLEH FLVKSEEWIY EKEHRVILPL ITADKIIVHE
KYLPKIEFTL YDSSELNKVP LDNNMYLINL KEVTERDGNR FLSGWYSSTT PEEDLKYGFI
ESTYLEYLRE ISEDPSTIFL YQVPPKAIKS IFLGCRVSCE DRNAVMEKIR TSDSLNHIEI
FQATPSNERF ELEFKKLTKA
|
|---|
| |