Gene Shewmr4_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1387 
Symbol 
ID4251406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1614698 
End bp1615057 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content53% 
IMG OID638117986 
Productrhodanese domain-containing protein 
Protein accessionYP_733522 
Protein GI113969729 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00873164 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000184443 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCCAT CCAGTGCTTT TTCAGCCCTT GTCGAATCGA TTCGACCCCA TGTCGTTGAA 
GTGAGTATTG AGGCCTACCA AGCCGATGAC ACTTGGGTAT TGATTGATGT CCGTGAAGAT
AACGAGTGGC TACAGGATCA TCTGCCGCAG GCGAAACATA TGAGCCGCGG CATTATTGAG
CGCGATATTG AACAGCGCTT CCCCGATAAA CATACGCCTC TGCTGCTCTA TTGCGCGGGC
GGCGCACGCT CTGTACTGGC GGCCAGCAGT TTGCAACTGA TGGGTTACCA AAGGGTGGCC
TCCTTGATTG GGGGTTATAA AGGCTGGATC CAACGCCAGC TGCCCGTGGT GCAAGATTAA
 
Protein sequence
MNPSSAFSAL VESIRPHVVE VSIEAYQADD TWVLIDVRED NEWLQDHLPQ AKHMSRGIIE 
RDIEQRFPDK HTPLLLYCAG GARSVLAASS LQLMGYQRVA SLIGGYKGWI QRQLPVVQD