Gene Shewmr4_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1348 
Symbol 
ID4251367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1562008 
End bp1562388 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content52% 
IMG OID638117932 
Productputative lipoprotein 
Protein accessionYP_733483 
Protein GI113969690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.015977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA TCCTCTCAAG TGCATTAGTG CTACTGCTTA GCGCCTGTGC CAGCGATTAC 
AGTTTTAACA GCAATTTGGA CGGCGAGGCG ATTAATGACT ACTTCAAGGC GGGAGATGTC
ACGCTATTTG AGGGCGATAG TTTGCCTAAA GGCCATTACG AATTAAAAGG TTTGGTACAG
GGTGAATCTT GCCAAGCCGA TGTGAATGCA GTGCCCGCTT CCTTAAGTGA AGCCCGGACC
GAAGCCCGCC GCGCGGCGGC TGATAAAGGC GCCAATGGCA TCATCATCAA ACAATGCGTG
ATGATGGAAG AAGCAGCCCA AGGCTGCGTC AGCCGCGCCC TCTGCGTTGG CCAAGCCATC
AAAATGGCCT CTGCCGACTA A
 
Protein sequence
MKIILSSALV LLLSACASDY SFNSNLDGEA INDYFKAGDV TLFEGDSLPK GHYELKGLVQ 
GESCQADVNA VPASLSEART EARRAAADKG ANGIIIKQCV MMEEAAQGCV SRALCVGQAI
KMASAD