Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1260 |
Symbol | flgC |
ID | 4251316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1466924 |
End bp | 1467340 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638117846 |
Product | flagellar basal body rod protein FlgC |
Protein accession | YP_733397 |
Protein GI | 113969604 |
COG category | [N] Cell motility |
COG ID | [COG1558] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR01395] flagellar basal-body rod protein FlgC |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTAT TTAGCATTTT TGATGTGGCT GGCTCTGGTA TGTCAGCCCA GTCCGTCAGG CTCAATACCA CAGCGAGTAA CATCGCTAAC GCCGATTCTG TTTCTAGCAG TATTGATAAA ACTTACCGCT CTCGTCATCC GATTTTTGAA GCTGAAATGG CCAAGGCGCA GAGTCAGCAA CAAGCCTCTC AAGGTGTTGC GGTGAAGGGT ATCGTTGAGA GTGATAAACC CCTATTAAAA GAGTATTCGC CGGATCACCC CATGGCGGAT GCGGATGGTT TTATTTATAA GCCGAATGTG AATGTCATGG AAGAAATGGC GGATATGATC TCTGCCTCTC GCTCATATCA GATGAATGTT CAAGTCGCTG AAGCCGCAAA ATCAATGCTG CAACAAACAC TTGGGATGGG TAAATAA
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Protein sequence | MSLFSIFDVA GSGMSAQSVR LNTTASNIAN ADSVSSSIDK TYRSRHPIFE AEMAKAQSQQ QASQGVAVKG IVESDKPLLK EYSPDHPMAD ADGFIYKPNV NVMEEMADMI SASRSYQMNV QVAEAAKSML QQTLGMGK
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