Gene Shewmr4_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1260 
SymbolflgC 
ID4251316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1466924 
End bp1467340 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content46% 
IMG OID638117846 
Productflagellar basal body rod protein FlgC 
Protein accessionYP_733397 
Protein GI113969604 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAT TTAGCATTTT TGATGTGGCT GGCTCTGGTA TGTCAGCCCA GTCCGTCAGG 
CTCAATACCA CAGCGAGTAA CATCGCTAAC GCCGATTCTG TTTCTAGCAG TATTGATAAA
ACTTACCGCT CTCGTCATCC GATTTTTGAA GCTGAAATGG CCAAGGCGCA GAGTCAGCAA
CAAGCCTCTC AAGGTGTTGC GGTGAAGGGT ATCGTTGAGA GTGATAAACC CCTATTAAAA
GAGTATTCGC CGGATCACCC CATGGCGGAT GCGGATGGTT TTATTTATAA GCCGAATGTG
AATGTCATGG AAGAAATGGC GGATATGATC TCTGCCTCTC GCTCATATCA GATGAATGTT
CAAGTCGCTG AAGCCGCAAA ATCAATGCTG CAACAAACAC TTGGGATGGG TAAATAA
 
Protein sequence
MSLFSIFDVA GSGMSAQSVR LNTTASNIAN ADSVSSSIDK TYRSRHPIFE AEMAKAQSQQ 
QASQGVAVKG IVESDKPLLK EYSPDHPMAD ADGFIYKPNV NVMEEMADMI SASRSYQMNV
QVAEAAKSML QQTLGMGK