| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1227 |
|---|
| Symbol | |
|---|
| ID | 4251266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1426690 |
|---|
| End bp | 1427832 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638117812 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_733364 |
|---|
| Protein GI | 113969571 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0535781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATA ACGAAATAAA CGCGTCAGTA GAACCAGTAG CAGCGAGTGA AGCTGAATCG
ACGCCTGATG TAACGCTCGG CACTGTACTC AGAACGGCCC GTGAACAGAT GGGCTTAAGC
ATTGCGGATA CCGCGGTGAA GTTGCACTTG CGCCCAGGGA TTGTTGAAAA TCTCGAAGCC
GACGATTTTT CCAATATTTC TTCTTCGACT TATGTTCGCG GATACGTCAA AAACTATGCG
CGCATGCTGG GGGTGGATAA CGCCCTGATT GAGGCATGCC TCACGCGGCA GGTGCCCTTA
GTCACACAGC CTGCGATGCA AAGCTTTTCC CGCAAGACGA CCTATCAAGC TCGTGACACT
AAATTAAAGT GGCTGAGCTT TTTTATTGTC ATCGTGTTAC TGGGCTTGTT CGTCCTATGG
TGGATGCAAA GAACTACGCT GGTGACCCAT GTCGATATCT CTAAACCAAC TGCAGAAGAG
TTAGCTGCCG CGAATCAAAC CCTACCGGGC GATGTGCTGC TGACGGAAAC CGACGCGAGC
GAGCGCTTAA GCGAGATTGC GGTCAATGGC TCTATGGCGA CCGATGGTCC GGTAAAAGAT
ACTGATGCCA GTACTATCGA CCCTAATATG AACGATTCGG CAGCGATGGA AGCTGAGCAG
ACGTCTGCTG CCAATTCGGC TATGAATGCG AGCGAATCTA GCACCGCACT GACGAACAAT
GCTTCTAACA CTGCACCGAA CACTGCGTCG ACCTCAGGAG CGAGTAATAT CGTTGCGGTT
CCAAACGCGA CACAAAATGG CGCGACCAAT ACCGCGCCAG TGCAGAACCA AACCGCATCG
AATACACCTG CAACTAATAC GGCTTCGACA GCGCAAGCTA TGCCAGTGGC TGCAGGGCAG
TCGAGCATTA CTATTGAGCT CACGGGCGAT TGCTGGATCA ACATAGTCGA TGCCAAGGGC
AAAGCGATTG TTGACGGCGT CCGGGGTGCT GGTGCGAATA TTCAAGCCAG TGGCGTGCCT
CCGTTTAAAG TGATCCTAGG TGCTCCCACT GTCGTGTCCA CGTTTACGGT TGATGGTAAA
GCCATCAGCC TTGCTGAATT TCCTAAGGGT CGTGTTGCGC GTTTGACTAT CCCACAGGTT
TAA
|
|---|
| Protein sequence | MKDNEINASV EPVAASEAES TPDVTLGTVL RTAREQMGLS IADTAVKLHL RPGIVENLEA
DDFSNISSST YVRGYVKNYA RMLGVDNALI EACLTRQVPL VTQPAMQSFS RKTTYQARDT
KLKWLSFFIV IVLLGLFVLW WMQRTTLVTH VDISKPTAEE LAAANQTLPG DVLLTETDAS
ERLSEIAVNG SMATDGPVKD TDASTIDPNM NDSAAMEAEQ TSAANSAMNA SESSTALTNN
ASNTAPNTAS TSGASNIVAV PNATQNGATN TAPVQNQTAS NTPATNTAST AQAMPVAAGQ
SSITIELTGD CWINIVDAKG KAIVDGVRGA GANIQASGVP PFKVILGAPT VVSTFTVDGK
AISLAEFPKG RVARLTIPQV
|
|---|
| |