| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1172 |
|---|
| Symbol | |
|---|
| ID | 4251456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1378326 |
|---|
| End bp | 1378898 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638117753 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_733309 |
|---|
| Protein GI | 113969516 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000985438 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCATC ATTCATCTAT CTTGTCAGCG ATGTTGTTAA AAAAGCGATA TCTCGGCGCT
CTGTGTGGAT TAATGCTGCC AGTCGCAGGA TATAGCGCCA CGCAAGCGGC CATCGAAAAT
ACTATGGCCT CAGGGCTGGT TGAGGTTGGC CGAGGTGAGA TGGATTGGCT CTGGTTTAAT
GTCTATAAAG CCACACTGAT GACTACTACG GGTAAATACC AGAGCGGGAT TTATCCGCAG
TTATTAGACA TTGAATATTA TCGTGATATT GAGGCGAATG ATCTGTTAGA GGCGACGGCA
GATCAGTGGC GACACTTAGG CTACACCAAG GATGAAATTG CCAATTGGCT GCAATTACTC
AAGGGAATTT GGCCTAATGT TGTGCCTGGC GATCATTTAA GTTTCAAACT CATCGATGCG
CAGCGCAGTC AGTTCTTTTT CAATGGTCAG CTGCTTGGCG TTATAGAAGA GCCCAAATTA
GCCGAAGCAT TTCTGGCGAT TTGGTTATCG ACCAATACCA GCAGGCCAAC CTTAAGGGCG
CAATTATTAG GAGAAAAATC ATGCGATTGC TAA
|
|---|
| Protein sequence | MLHHSSILSA MLLKKRYLGA LCGLMLPVAG YSATQAAIEN TMASGLVEVG RGEMDWLWFN
VYKATLMTTT GKYQSGIYPQ LLDIEYYRDI EANDLLEATA DQWRHLGYTK DEIANWLQLL
KGIWPNVVPG DHLSFKLIDA QRSQFFFNGQ LLGVIEEPKL AEAFLAIWLS TNTSRPTLRA
QLLGEKSCDC
|
|---|
| |