Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1166 |
Symbol | |
ID | 4251450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1373174 |
End bp | 1373620 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638117747 |
Product | transcriptional regulator-related protein |
Protein accession | YP_733303 |
Protein GI | 113969510 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAACC AAGCGAAGAT TGAACAGAGC GGTGTGGTTG ATGAGTTTAT CGCGCTCTAT CAAGCATTAA ACAAGGACAA TCTGCATCTG CTGGCTCAGG TCTACGATGA CAATATTTGT TTTATCGATC CTATGCATCA AGTGAATGGT TTAACTGCCT TGACTGAGTA TTTTGCCAAA CTCTACAAAA ACGTTGGCTA CATTCACTTT GAAATCAAAG AAGTATTGCA AGATGACTCC CAAGCTTCGC TATTCTGGCA GATGCAATAT TGCCATCCTA AATTAAACAA GGGCGAACTT ATCCGGGTTG ATGGCATGAG CCAGCTTAAG TTTCATCAGC TGATTTACTT TCACCGGGAT TATTTCGACT TAGGGCAAAT GCTGTATGAG CATTTGCCTT GCATGGGCGG TCTCATTCGC CTGCTTAAAG ACAGGGCGGC AAAGTGA
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Protein sequence | MINQAKIEQS GVVDEFIALY QALNKDNLHL LAQVYDDNIC FIDPMHQVNG LTALTEYFAK LYKNVGYIHF EIKEVLQDDS QASLFWQMQY CHPKLNKGEL IRVDGMSQLK FHQLIYFHRD YFDLGQMLYE HLPCMGGLIR LLKDRAAK
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