| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1091 |
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| Symbol | |
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| ID | 4251059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1281551 |
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| End bp | 1282474 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638117664 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_733228 |
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| Protein GI | 113969435 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.93926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGAC TCGAAGCGGC AAAGGTGTTT GTGACTATTG TCGAACGAGG GAGCATGATT
GGCGCCGCCG AGGCGTTAGA TATGTCGCGC TCCATGGTGA CCCGTTACTT GGCAGAGATG
GAAGAATGGT CGGGCGCCCG TTTGTTGCAC CGCTCTACAA GACGTTTGAG CCTGACCGAT
GCGGGTGAAC AAGTGCTCGA TTATTGTCAG CGCTTACTTG AGCTGGCGCA GGAAGTCCCT
GCCGTCAGTC ATGCTCAGAG TGCCCAGCCC CGAGGGCTAC TGCGGATCAG CTGCTCGCAA
TTTATGGCGC ATTTACTCCT CCCCAGCGTC GTGCGTCCTT ATTTAGCTCA ATACCCGCAG
GCGAGTGTGA ACTTTCATGT GACGAGTCAA ACCGTTGATT TAGTAGCTGA ACGAATCGAT
CTTGCCATTC GTATCACCAA CGAACTCGAC CCTACGCTTA TCGCCAGACG TTTAGGCGAG
TGTGAGTCTG TGGTGTGCGC GGCGCCGAGT TATCTTGCCT GCCATTCGGC CATCACGCAT
CCCGAGAATT TAACTCGGCA TAACTGCCTA ACCTATTCTT ACTTTGGCGA TGTGATGTGG
CGATTCACTC AAACGCCTAT CGCCGCGAAG GCAACGTCAA CGCAGGAAGT CGGGCAGATA
TTCAATATTC CGGTGAAGGG CAACCTAAGT GCCAATGACT CTATGGTGGT GTTAAACGCC
ACCTTGGCGG GGGAGGGAAT TGCCATGCAG CCCCTGTGGG CGGCTAAACC GCACCTCGAT
TCGGGGGCAT TAGTGCCATT GCTGCGGGAA TATAAACCTC AATCCCTCGG CGTGTACGGG
GTGTATCAAT CCCGCAAACA TATGCAGCCC GCATTAAGGG TGATGATGGA TATGCTAGTG
CAGCATTTTA ATGGGGCAAT TTGA
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| Protein sequence | MDRLEAAKVF VTIVERGSMI GAAEALDMSR SMVTRYLAEM EEWSGARLLH RSTRRLSLTD
AGEQVLDYCQ RLLELAQEVP AVSHAQSAQP RGLLRISCSQ FMAHLLLPSV VRPYLAQYPQ
ASVNFHVTSQ TVDLVAERID LAIRITNELD PTLIARRLGE CESVVCAAPS YLACHSAITH
PENLTRHNCL TYSYFGDVMW RFTQTPIAAK ATSTQEVGQI FNIPVKGNLS ANDSMVVLNA
TLAGEGIAMQ PLWAAKPHLD SGALVPLLRE YKPQSLGVYG VYQSRKHMQP ALRVMMDMLV
QHFNGAI
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