Gene Shewmr4_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1079 
Symbol 
ID4250784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1264990 
End bp1265481 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content50% 
IMG OID638117652 
Productglobin 
Protein accessionYP_733216 
Protein GI113969423 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATT TTCGCAAGTT TCTCGCACAC TTAACCACGG CACTTTTAAT CACAGCACTT 
CCAATCTCGA CAGTTTTACT TGCTGGCTGC GCCCAATCTG ATCCTAACAC CCCATCACCT
AGTGCGAACG CCAGTCCTAC AACCTTGTAT CAGGCCCTCG GTGATGATTC GGGCGTTTCG
GCTATCGTTG ATGGCTTGCT TGCGCGTATC GCGCGGGATC CCCGCATTGT GCACCACTTC
GATGAAACGG ATATTGCCAT CTTTCGCGAG CGTCTTATCG AACATTTGTG CGCTGTCACG
GATGGTGGCT GCGTCTATCA AGGCGAAAAC ATGGCAGACA GCCATAAAGG TTTGAATATC
ACTCAGGCCG ATTTTGATGC TTTAGTCGGG CATTTGATTG AATCGATGAA GGAACAGCAT
ATTTCAACAT CGACCCGCAA TGCGCTGCTG AAGCGCCTTG CGCCCATGTA TTCCGAGGTG
ACGTATCAGT AA
 
Protein sequence
MSHFRKFLAH LTTALLITAL PISTVLLAGC AQSDPNTPSP SANASPTTLY QALGDDSGVS 
AIVDGLLARI ARDPRIVHHF DETDIAIFRE RLIEHLCAVT DGGCVYQGEN MADSHKGLNI
TQADFDALVG HLIESMKEQH ISTSTRNALL KRLAPMYSEV TYQ