| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0929 |
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| Symbol | |
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| ID | 4251860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1083641 |
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| End bp | 1086787 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117492 |
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| Product | hypothetical protein |
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| Protein accession | YP_733066 |
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| Protein GI | 113969273 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTAA AGGATGACGT TGACCAACTC AAGGCAGAAT TGGCGCAGTT AAAACTGCAG
CACCTGTCGC AGCAATCTTC ACTCAGCCGC CAACTGGCAG AATTCTCGGC CAAGCTCGAC
AGCATCAGTC TTCAGCTTGA GCAGCAAGAC AATGGCCCTC TCACCACCCC ATCCACGAGT
GTGGACGATA TCACGGCGCC ATTCGGCACG ACGATTGATT CAGGGGATGA GCGCGTTTCG
CAGCAATCTG AAGAACTGGC CTCCCATATC CAGCCACAAA TGCCCGAAGT TAATTCTTGG
CAAGACGATC CTTGGCAGCG CCACGCAAAG GCTCCCTCAA AAGCCATGCA TTCACCTGAG
GATTCGCAGC AGGATGATTC GCAGAAAGAT AAGGCCTTTT CTCAGCAAGC CGGACTTGAA
GTGGGTGTGC AGGCCGCAAG TCAGTTAGAG ACCTTATTAT CCCAAGGCGT TACCGCCATC
ATGGCGCCAT TTGCGGCCAT CTCTGAACAG GTCAAAGGCT TCTATCAACA TTATCAAGCC
AAGGGCTTAG GCCCAGTGTT TTTAATGACG GTTGCGGGCA TCATCACCCT GACCCTAGGC
TTTGGTTATC TATTGCAATA TTCCATCAAT CATTGGTTTT CTGAACTCGG TAAAGCCCTG
CTGGGTTTTG GCTGCGCCAA TGCGATTATT GCGGGCGGGA TTTTTATCCG CCAAAAAAGG
GCGGGCATGG CCGACTTTGG CTCTGGAATT GTCGGATTAG GCCTCATCCT AAACTATCTC
TGCGCCTATT TTATTGGCCC CTACTTTGAG ATTATCCCCA ATAGTGCCAG CTTTATCCTG
CTGCTATTGA TTACTTTAGC GGGCTATGGC CTGTCGATGC GACTCGATGC CAAGGTCATT
GCCGTCATTG CCTTAGTCGG CGGCTCGATG GCACCTATGA TGCTGCTATC CCAAAGCTAT
GCGCCGTTAC TGTATATTCC CTATCTGCTA CTGATTGGTG CGGGCGCCCT CGCCCAAAGC
CGTAAATTAC ACTGGCCATT ACTGCTGGAA ATCACCGCAT TCCTGCATAT CGCCTGCATC
GAAGCCTTCA GCTATTTTGT CGATTTACCG CTCACCCAAT GGGGTGGCGG CGCAGTGCTA
GCCCTAGTAA GCATTAACGC ATTGTTTTAT CTCTATGGTC TATATGGGTT TATGGTGAAT
CCTTCAACGA CCTCACTCAG CCATAGAGCC CTAGTTCTAC CGATAGCCCT GCTGGCCTTT
GTAATCTTCG AACTCACCCA ATTTACGCCA TTTGCCGGGG AGATTTTTAT CGCCAACGCA
CTCATCTGTG CGGGCTTATA CCTTAAGCTC AAGTCTCGAC TCACCCCGTC CCAGAGCAGT
CTCTTATTAG TCTTTGGCGG TAGTTTTGCC GCTTTTGCCG CCCTTTATCT ATTAAGCCAT
GATTTCCTAG GATTAGTGCT TATCCTCGAA GCATTGCTCC TGCTCTGGAT TGGCCTTAAG
GAGAAACTGA TTTCGGTGCG CGCCGAAGCC TATGTGTTAT TACTGACAGG GCTGATGCTC
AATTTATATG CGGTGCTGAC AGGTTTTTCC TTTCTCGGAC TTGGCGAGCA AACGCCCATG
GCGGCACTTG GGTTCCCGCT GCTCGCCTTA GCCTTAAGCG CGGCGGCCCT GCTATTTGTT
ATCCGCCAAA TAGGCAATGA TGAGTTGCTA CTGTCACGGC TCGAGCGGCA ACTGAGCTAT
TTACTCAAAG AGTTACTCAG CGGTTTTTAT GCGGCGACCC TTTTGCTGGC GGCTTTCCTT
GTCAGCAGCG ATTATTATGT CGCCATCATC CCGCTCGTGA GTCTATTGCT CTTGTATTTA
AGTGGTAAAG ACAAGTTGAT GGTCAGCGAG TTTGCCGCTT GGCTATTGCT GCTGCCACTC
TTGTTTACTG TGGTTGAAGG CGTGACCCTT ACTGACAGCC TGAGCTTTAG TGCGCAACCA
CTGATGGCCA AGCTGGCACG CATCGAATTG TTCGCCGCCC TGCTACTGGC CCACTATTGG
TATCGTAAGC ATTATCCAAG TTCGCTGTTC GCCCAAGCCG CCAAGCAAAT ACAACTCGGC
TGTTATCTGC TACTGCCGCT GATGTTATTG CCTAAGGTAA TGCGCAGTTA TTGGGAATTT
ACCGCGGTTG CACTCTGGCT CAGCAGTTTG TTCAGCCTCG CCCTTGCCTA TGTTATCAAG
CATAAAGCCC TTGAAATTGA AACCAAGATT TTGACTTGGC TGGCGATACT CACCACCGCC
AGTTTGTGCC TGTTTGAAGT TTGGCAAGGG CTTATCGCAC TGCTAATTGG CGTCCTAGTC
ATGGGCTTTG TACTGCTGCG TTATCGCAAG CTTGCCAAAC CTTGGGCATC ACTGCTACCC
CTGCAATGGC AACTTAGCCC TTATTATTTC GCGCTAGTGC TGGCCGTATT AGTCTATGGA
TTTAACCGCG TCGATGTTGT GGCATGGTCG ATGACGGCTT TAGCCCTGAG TGGCTACTTT
GCCCTCTTGA TCCAAAGACG CACCCAACAT GGCTCAGTGC AAACGGGATT GATGGCGCAC
ATAGCCATAG AAACCCAAGC CGCGGTGCGC TCAAGCTACA GCATGGCCTA CGGGCTGTGT
CTGGGGCTCG CGCTATTGCC GATAATGCTG CACTTTGAGT TGTCGCTAAG ACTCGATCTG
AATAACGTGT TATTAATCCT CTGTGAATTG ATGGCATTAG CCCTGCTCGC GCTACTTATC
TTACGCCGCG GCGTCGCTAT TCGTTTGCAT CAGCGCTTCT TACCGCTGCA GTGGCTCAAA
TGGGGCTGGC ACGGGTTGCT CGCACTGAGT TATCTCACCT GGAGTTATAC GTTCGATAAC
ATTATTGCCG CACCACTCAG TGCCATTCTG CTCGTCGTGC ATGGCAGCGT GTTGATGTTT
ATCAGCCTAA AACCCCAGCA TGCGGATATG ATCCGCCTCG CCGCCGGACT CTTTACCTTA
GCCACACTCA AAGTGTTATT GCTGGATATG GCATCCTTCG AGCTAGTACA AAAGGTTATC
GCCTTTATGG TGATTGGGGT GATCTTACTG ACCGTATCTT ACTTCTATCA AAAGGCGCGT
AATCGCCTAC AAGAAGCAAA CCAATAA
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| Protein sequence | MPLKDDVDQL KAELAQLKLQ HLSQQSSLSR QLAEFSAKLD SISLQLEQQD NGPLTTPSTS
VDDITAPFGT TIDSGDERVS QQSEELASHI QPQMPEVNSW QDDPWQRHAK APSKAMHSPE
DSQQDDSQKD KAFSQQAGLE VGVQAASQLE TLLSQGVTAI MAPFAAISEQ VKGFYQHYQA
KGLGPVFLMT VAGIITLTLG FGYLLQYSIN HWFSELGKAL LGFGCANAII AGGIFIRQKR
AGMADFGSGI VGLGLILNYL CAYFIGPYFE IIPNSASFIL LLLITLAGYG LSMRLDAKVI
AVIALVGGSM APMMLLSQSY APLLYIPYLL LIGAGALAQS RKLHWPLLLE ITAFLHIACI
EAFSYFVDLP LTQWGGGAVL ALVSINALFY LYGLYGFMVN PSTTSLSHRA LVLPIALLAF
VIFELTQFTP FAGEIFIANA LICAGLYLKL KSRLTPSQSS LLLVFGGSFA AFAALYLLSH
DFLGLVLILE ALLLLWIGLK EKLISVRAEA YVLLLTGLML NLYAVLTGFS FLGLGEQTPM
AALGFPLLAL ALSAAALLFV IRQIGNDELL LSRLERQLSY LLKELLSGFY AATLLLAAFL
VSSDYYVAII PLVSLLLLYL SGKDKLMVSE FAAWLLLLPL LFTVVEGVTL TDSLSFSAQP
LMAKLARIEL FAALLLAHYW YRKHYPSSLF AQAAKQIQLG CYLLLPLMLL PKVMRSYWEF
TAVALWLSSL FSLALAYVIK HKALEIETKI LTWLAILTTA SLCLFEVWQG LIALLIGVLV
MGFVLLRYRK LAKPWASLLP LQWQLSPYYF ALVLAVLVYG FNRVDVVAWS MTALALSGYF
ALLIQRRTQH GSVQTGLMAH IAIETQAAVR SSYSMAYGLC LGLALLPIML HFELSLRLDL
NNVLLILCEL MALALLALLI LRRGVAIRLH QRFLPLQWLK WGWHGLLALS YLTWSYTFDN
IIAAPLSAIL LVVHGSVLMF ISLKPQHADM IRLAAGLFTL ATLKVLLLDM ASFELVQKVI
AFMVIGVILL TVSYFYQKAR NRLQEANQ
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