| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0861 |
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| Symbol | |
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| ID | 4250583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1013317 |
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| End bp | 1014579 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117424 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_732998 |
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| Protein GI | 113969205 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAG ATACCAGCGG CCAAGATAAA GTCCTTGTGC CATCGACCGC CAAACGCCTC
AAGTTGCCTC TAATGATTGG CGGCTGCACC TTACTGGTTA GCGCCTTAGT GTGGGCCAGT
TTTGGTAGCG ATAAAGTCAG CCAGTCCATC AGCCGTAGCG AGCTCACGAC CGCAACTTTG
TACGTTGGCA CGCTCACTCG AGATGTGGCC ACCACGGGCA AAATTGTTGC CGCCAATGCG
CCAATCCTCT ACAGCACCGA AGAAGGCACA GTGACGCTAC TGAGCAACCC AGGTGATAGC
GTCAGCAAAG GTGATGTGGT CGCAAAGCTG GACAGTCCAA GATTAACCAA TCAATTAGAG
CAGGCGAAAT CGCTATTGGC GGGATTAGAG AGCGCCCTTG AGCGTGCCAA GCTAGATGCC
AGACGTAACC AATTACAAGT CAATCAAACC TTAGACATGG CCTCGGTCGA TTTGGAAGCG
GCCGATCGGG AGAGCCGCCG TGGGGATTTA TTGATCCAAT CTAAACTGAT CAGCCAAATC
GACTATGAGA AGGGCAAGGA CGATCTGCAC AAGGCAAAAC TCAAGTTTAA GCATGCGGAG
CAGGAAGTGG CCTTAACCAA GGATACCTTA ACCTTTGAGG TGAAAAACAA GGCCTTGGAA
GTGGAGCGTC AGAGTTTGGC GGTAAATGAG CTTGAGCGTC AGGTCGACGC CTTAAATATC
AAGGCGCCGG TGAGCGGCAT TATTGGTAAC TGGTTGACCG AGCAAAAAAC GCGTCTGAGC
GCCAATCAGC CCATCCTGAC TGTGGTCGAT TTAAGTGCCT ATGAGGCCGA GTTGGCGGTG
CCTGAATCCT ACGCCGACGA GTTAGGGCTC GGAATGGAGG TCGAACTGAG CTTCGGTGAA
GTCAAACTCA TGGGCAAGTT ATCCTCGATT TCCCCCGAAG TGCGTAACCG TGAAGTGACC
GCCAGAGTGC AGTTTGTCCA GAGCGAAAGC TTGAAGCTGC GCCAAAACCA ACGGATCTCC
GCCAGAGTCT TACTCGAACA CAGGGCGAAT GTGTTGATGG TTAAACGCGG TGCCTTTATG
ACCAGCGGTG GCGGTGATGA GGTGTACCAA GTCGAAGGCG ATATCGCTAC CCGCCGCGAG
ATTAAGCTTG GCAGCACCAG CATGAGTCAG GTGGAAGTGA TCGAAGGCGG TAAAGCGGGT
GACGAATGGG TGATCTCCAG TGTTGAGCCC TTTAACCATG CCGAACAGGT CAAAATGCAT
TGA
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| Protein sequence | MIKDTSGQDK VLVPSTAKRL KLPLMIGGCT LLVSALVWAS FGSDKVSQSI SRSELTTATL
YVGTLTRDVA TTGKIVAANA PILYSTEEGT VTLLSNPGDS VSKGDVVAKL DSPRLTNQLE
QAKSLLAGLE SALERAKLDA RRNQLQVNQT LDMASVDLEA ADRESRRGDL LIQSKLISQI
DYEKGKDDLH KAKLKFKHAE QEVALTKDTL TFEVKNKALE VERQSLAVNE LERQVDALNI
KAPVSGIIGN WLTEQKTRLS ANQPILTVVD LSAYEAELAV PESYADELGL GMEVELSFGE
VKLMGKLSSI SPEVRNREVT ARVQFVQSES LKLRQNQRIS ARVLLEHRAN VLMVKRGAFM
TSGGGDEVYQ VEGDIATRRE IKLGSTSMSQ VEVIEGGKAG DEWVISSVEP FNHAEQVKMH
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