| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0852 |
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| Symbol | |
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| ID | 4251835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1006485 |
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| End bp | 1006880 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638117415 |
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| Product | methylation site containing protein |
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| Protein accession | YP_732989 |
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| Protein GI | 113969196 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA GTAAAATCAA AGTTAATACT GGATTTACGC TAATTGAATT GATGATAGCT
ATTGCCATAG TCGGCATACT GGCCAGTATT GCATTACCGT CATATCAGGA GCATGTACGC
AACACCCGTA GGACTGATGC CCGTGATGCA CTAAGCAATG CCGCTCAGAT TATGGAGCGC
CAATACACAT CAACCAATAC CTATACTGGT GGCACTATAG TCAAAGATGT CGCATTTTCC
TCGCCAAGTG GTTATTACAG TGTGACGGCC ACCGAACTGA CAACGGGCAC CTATACCTTA
GTCTCAACGG CTAATGCCCC CCAGGATAAA GACGTTGCCT GTAAAACCAT GAGCATCAAC
CATACAGGTA CGAAGACGCC AGCTGCATGT TGGTAA
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| Protein sequence | MKLSKIKVNT GFTLIELMIA IAIVGILASI ALPSYQEHVR NTRRTDARDA LSNAAQIMER
QYTSTNTYTG GTIVKDVAFS SPSGYYSVTA TELTTGTYTL VSTANAPQDK DVACKTMSIN
HTGTKTPAAC W
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