| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0789 |
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| Symbol | |
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| ID | 4251511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 919571 |
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| End bp | 920788 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117352 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_732926 |
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| Protein GI | 113969133 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA CTTTACTCAG GAGATTATCT CCTCTGTTTA TACTGCTGTT ATTTGTTATT
GGCGCGTTTG CACTGATGTC AACCAAGGAA GCTCCCGAAC AGAAACCCGA AGAAATGCCA
GTACCTATCG TGGATGTCAC GCAGGTTGAG CAGCAAACGG TATCGCTTAA TCTTCCCTCC
TACGGGGTCG TCACGCCTAA ATATAAGACG CAACTAGTGA CCGAAGTTCA AGGGCGGATG
CTGAGCATTT CACCGCAATT TGTGGCCGGT GGCATAGTGA AGAAAGGCGA CCAATTAGCC
CAGATCGAAC CTTCGGATTA CGAAGCCGAT TTAATGCAAG CCGAAGCCAC CTTGGCTCAG
GCAACTGCGG CGCTCAATGA AGAAATCGCC CGTGGCGAAG TCGCTAAAAT CGAATTTAAA
GGCTACGACA AAGGCTTGCC GCCAGAGCTG GGTTTACGTA TTCCACAGCT GAAAAAAGAA
CAAGCCAACG TGAAATATGC CCAGGCAGCA CTGGCACGCG CCCAACGTAA CTTAGAGCGC
ACTGTCATCC GCGCGCCCTT TGACGGCATT ATCAAAGCCA GAAATGTCGA TTTAGGTCAG
TACGTTACAT TAGGCACTAA CTTGGGTGAG CTGTACGACA CTCGCATTGC GGAAATTCGT
CTGCCTATCT CTAACGATGA TTTAGCCTAT TTAGAATCGG TCGATCATCC CGATACCCAA
GTCACCTTGA GCGCCTCTTT AGCGGGTAAA GAAAACACTT GGCTAGGAAA TATCATTCGC
AGTGAAGGCG TGATCGATGC CGATAACCGC ATGGTTTACC TCGTCGCCGA GATTAAAGAT
CCTTACCTGC GTGAGCACAA AACCCCTGGC AGTTTACCGC TGAAATATGG CAGCTTTGTC
AACGCCGTGA TTAAAGGTCG TACCGTCGAT GGCATTGTCA AACTGCCACG CCACGTAGTG
CGTAATGAGC ATGTTGCCTT GATTAACGAT CAAAACATTG TCGAAATGCG CCACGTGAAT
GTAGTGCGTA GCGATCTTGA ACATGTATTT ATCAAGGACA GCTTAAAAAC CGGTGAGCGC
GTTGCCATCA CTCACTTTAG CAATATGGCG AATGGCCAGC TGGTCAAAAT CATAGGTGAA
GATGCCAAGC CAGTGCAGAC ACCCACACCT AAGGAAGATG CTCCTGAGTC GAGTCTTGCG
GCCGCTGGAG TGAACTAA
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| Protein sequence | MMKTLLRRLS PLFILLLFVI GAFALMSTKE APEQKPEEMP VPIVDVTQVE QQTVSLNLPS
YGVVTPKYKT QLVTEVQGRM LSISPQFVAG GIVKKGDQLA QIEPSDYEAD LMQAEATLAQ
ATAALNEEIA RGEVAKIEFK GYDKGLPPEL GLRIPQLKKE QANVKYAQAA LARAQRNLER
TVIRAPFDGI IKARNVDLGQ YVTLGTNLGE LYDTRIAEIR LPISNDDLAY LESVDHPDTQ
VTLSASLAGK ENTWLGNIIR SEGVIDADNR MVYLVAEIKD PYLREHKTPG SLPLKYGSFV
NAVIKGRTVD GIVKLPRHVV RNEHVALIND QNIVEMRHVN VVRSDLEHVF IKDSLKTGER
VAITHFSNMA NGQLVKIIGE DAKPVQTPTP KEDAPESSLA AAGVN
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