| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0778 |
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| Symbol | |
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| ID | 4251500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 905598 |
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| End bp | 907067 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117341 |
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| Product | Na+/H+ antiporter |
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| Protein accession | YP_732915 |
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| Protein GI | 113969122 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | [TIGR00775] Na+/H+ antiporter, NhaD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.827414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAC AACAGTGGTT TAAAAACAGT GGAGTGGTGC TATCTAGCCT ATTCTGCGTT
GCAATATTGA GCGGATTCTC ACCAGCAGTT TGGGCAATGA CCGAAGGAAC AGAACGGCTC
GATTTAACCG CTGCATCAGT GGGGTATATT GCCGTATGCG TCTTCGTTCT CGCCTATATT
TTGGTGATGG CCGAAGAGGC GCTGCACCTG CGTAAATCCA AACCCGTATT GGTCGCAGCC
GGCATTATTT GGGGCATGAT AGGTTTTGTG TATGTGCAAA ATGGCATGTC GGAGGTTTCC
GAGGCGGCCT TTAAGCACAA TCTACTGGAA TACGCCGAGT TATTACTTTT CCTCTTAGTG
GCGATGACTT ATATCAACGC CATGGAGGAG CGTAACTTAT TCGATGCGAT CCGCGGTTGG
TTAGTCGGAC GGGGGTTTAG CCTGCGAACC GTGTTCTGGC TGACCGGGTT TATGGCGTTC
TTCATCTCGC CGGTGGCCGA TAACTTAACC ACGGCGCTCT TGATGTGCGC CGTGGTGATG
AAAGTGGGCG CTGGTCAGCG CAAATTTATT ACACTGGCGT GTATTAACAT TGTGGTCGCA
GCGAATGCGG GCGGTGCCTT TAGCCCCTTT GGCGATATCA CCACCCTGAT GGTGTGGCAA
AAGGGCTTAG TGCACTTTGC GGACTTCTTC CATCTGTTTA TTCCCGCCTT GGTTAACTTT
GCCTTACCCG CGGCCATCAT GAGCGTGTTT ATCCCAAGTT ATGTGCCCGA GCCTGAAAAA
GAGCAGGTGT ACACTAAACC TGGCGCGAAA CGTATCGTGG CGTTATTCCT GCTGACCATT
GCGACGGCGG TATGCGCGCA TTCCTTCTTC GGCATGCCGC CGGTCCTTGG GATGATGACG
GGTCTAGGCT TCCTACAGTT CTTCGGTTAC TACCTGCGTA AGACCTTCGA TAAATCCGTT
GCCCGTGAAC GCGCGAAGGC GGAGTTACGC CGCGATGAGC GACGCCTACA ACAACTCGGC
AGTGTGGTGC CCTTCGATGT GTTTAGCCGG ATCTCCCGTG CCGAATGGGA TACCTTACTG
TTCTTCTACG GTGTGGTGTT GTGTGTCGGC GGCCTTGGCT TTATGGGGTA TTTGAGCCTA
GTGTCTGAGG CGATGTATTC CCACTGGGAT GCGACCTATG CCAACGTGGC TATCGGTCTG
TTGTCTTCGG TTGTCGATAA TATTCCGGTG ATGTTCGCCG TGTTGACCAT GAACCCTGAG
ATGGCCTTAG GCCAATGGTT ACTGGTGACC TTAACCGCGG GCGTTGGTGG CAGTTTGTTG
TCCATCGGCA GTGCGGCAGG GGTGGCATTG ATGGGACAGG CGAGGGGGAT TTACACCTTT
GGCGCCCATT TACGTTGGAC ACCTGTGATC GCCCTAGGCT ATATCGCCAG CATTTTAGTA
CATATGTGGA TCAATGCTGC AATGTTCTAA
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| Protein sequence | MKLQQWFKNS GVVLSSLFCV AILSGFSPAV WAMTEGTERL DLTAASVGYI AVCVFVLAYI
LVMAEEALHL RKSKPVLVAA GIIWGMIGFV YVQNGMSEVS EAAFKHNLLE YAELLLFLLV
AMTYINAMEE RNLFDAIRGW LVGRGFSLRT VFWLTGFMAF FISPVADNLT TALLMCAVVM
KVGAGQRKFI TLACINIVVA ANAGGAFSPF GDITTLMVWQ KGLVHFADFF HLFIPALVNF
ALPAAIMSVF IPSYVPEPEK EQVYTKPGAK RIVALFLLTI ATAVCAHSFF GMPPVLGMMT
GLGFLQFFGY YLRKTFDKSV ARERAKAELR RDERRLQQLG SVVPFDVFSR ISRAEWDTLL
FFYGVVLCVG GLGFMGYLSL VSEAMYSHWD ATYANVAIGL LSSVVDNIPV MFAVLTMNPE
MALGQWLLVT LTAGVGGSLL SIGSAAGVAL MGQARGIYTF GAHLRWTPVI ALGYIASILV
HMWINAAMF
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