| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0767 |
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| Symbol | |
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| ID | 4251278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 892349 |
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| End bp | 893362 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117330 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_732904 |
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| Protein GI | 113969111 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCCG AAACCATCAA CCCCAATGTC AGCCTACTCG ATAGCGATCA CCAACAGGTC
AATCTCGGTC GCTGGATGCA CCAATGCGAG TTGATTAAAA GCTACTACAG CGCCAGCAGT
GTATTTGTGC TGCAAATGAC TCAGTCTGGG TTTGAAGTAA TTGTCAGCTC GGTGAGTGAG
ACGCCACTGT TTACCTCAGG CACTTTGTTT GCGAACGATT TCCCCCTGTT TGAACAACTA
AAGCATAGCC CTGCCGAGGG AGACTATCTT AATCTCGGCC GTTTTATGCT CGATGAATTA
CCACGGGATT TTGATGGTAT TCAACATATT CTCTCCCGCC CTATCGCTTG GCCCGACGGC
AGTCAATTTG GCTCCCTGTG CGTGTTAAAT CCCCATATGG TCGATCCTTT GAACAACAGT
GCTATGCTGG AGCCTTTCCA AATCTTGTTG CAGCAGGAAT TGTCACTGCT ATGCCAAAAC
CACCGGATTG AATCGCTGTC GATGCGCGAT CAAGAGACCG GCATGCTCAA CCATTATGGC
TTTATGATGA TGGCGCCTCG GCAGCTCAAT CTCGGACGCC GTTTCGGCGC CCATGCAGGA
CTCCTATTCT TCGAATTGAT TGGGGCAAAC ACGTCAGAAA ACAACTTAGA AGAGAAACAC
CACAGACTGC TGGGCAATTT GGTCCAGGAT ACTATTCGCA CCGCCGATGT GGCCGCCCAT
TACAGTGCAA CTCAGTTTGT GGTGTTAGCC TTTGTCGATA GTGAGCGCGA TATATTGCAC
ATTATGAAAC GGGTCGAAAA ACAATTAGAG CAGCAAAATC ACCATCTCAA ACTCGATGCC
AGTTACAGCT TTTTTACCCC CGAATCGACA GCCAAGTTAG CGCCCATGAT GGAAGATGCC
CGCAGTAAAC TCAAATCCAT GCAGCCAGAG CCTGAACCAA CCTCGGCCAA TCAAACGGCC
AAGATCGATG CCAAGCAGTA CGATAATCCC GCCGCCGACT CCGCCGAACT TTAG
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| Protein sequence | MLPETINPNV SLLDSDHQQV NLGRWMHQCE LIKSYYSASS VFVLQMTQSG FEVIVSSVSE
TPLFTSGTLF ANDFPLFEQL KHSPAEGDYL NLGRFMLDEL PRDFDGIQHI LSRPIAWPDG
SQFGSLCVLN PHMVDPLNNS AMLEPFQILL QQELSLLCQN HRIESLSMRD QETGMLNHYG
FMMMAPRQLN LGRRFGAHAG LLFFELIGAN TSENNLEEKH HRLLGNLVQD TIRTADVAAH
YSATQFVVLA FVDSERDILH IMKRVEKQLE QQNHHLKLDA SYSFFTPEST AKLAPMMEDA
RSKLKSMQPE PEPTSANQTA KIDAKQYDNP AADSAEL
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