Gene Shewmr4_0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0661 
Symbol 
ID4251592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp771521 
End bp772291 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content48% 
IMG OID638117224 
Producthypothetical protein 
Protein accessionYP_732798 
Protein GI113969005 
COG category[R] General function prediction only 
COG ID[COG3907] PAP2 (acid phosphatase) superfamily protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.47122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTA ATGTTAGGAC GACATTTTTC AGCTTCGCAA AGGGACATTT GCTTGCACCT 
TGGCTCGTGT TTGCGGTGAT TATTTTTTGG CTCGAATTGA CCCATGCCGA TATGCGATTC
GCCAGCATGT TATTTCACTG GCAGGGTGGT GTCGATTCTT GGCCACTGCG TGGCCATTGG
TTGACTGAGA ATTTGCTGCA TGTCACTGGG CGAAACCTGG TTATTTTGCT TGCCGTTGTC
GTGGTTAGCT GTATTGGTTT AAGCTTTCGC GTCAACAGAC TTCGCCCTTA CCGTAAAGGC
TTTATCTATT TATTCTGCAG TGTGCTGGCC AGCGTGGTGT TAGTGCGCCT TGGCAAAAAT
TTCACCCATA TGACTTGCCC TTGGGATGTG ATTGAGTTTG GTGGTCGTAT GCTGCACTCA
TCCCTGTTTG CTCGCTTGCC TGATGGCGCC GCGTTTGGTC AGTGTTTCCC CGGTGGACAT
TCGAGTGGTG GTTTTGCTTG GGTAGCAAGC TATTATGTGT TGAAGGAATA CCGCCCAGCT
TATGCCAAAG CGGGACTCAT CTTTGGGATA GTATTAGGCG CGGTGTTTGG TTTTGCGCAG
GAGCTGCGTG GTGCCCACTT TTTGAGCCAT GATCTCTGGA GTTTGGCAAT TGCCTGGACA
TCCGCCAGCT TGCTCTACTA TGGCTTCTTC CTTCGTGTGC CCAAGGTTAA AAAGATTAAA
GTCGCCAACC AAATCAGTAT TATCAATACT AAAGAAGCCA TCTCTAAGTG A
 
Protein sequence
MKSNVRTTFF SFAKGHLLAP WLVFAVIIFW LELTHADMRF ASMLFHWQGG VDSWPLRGHW 
LTENLLHVTG RNLVILLAVV VVSCIGLSFR VNRLRPYRKG FIYLFCSVLA SVVLVRLGKN
FTHMTCPWDV IEFGGRMLHS SLFARLPDGA AFGQCFPGGH SSGGFAWVAS YYVLKEYRPA
YAKAGLIFGI VLGAVFGFAQ ELRGAHFLSH DLWSLAIAWT SASLLYYGFF LRVPKVKKIK
VANQISIINT KEAISK