| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0633 |
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| Symbol | |
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| ID | 4251651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 732536 |
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| End bp | 735643 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638117196 |
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| Product | molydopterin dinucleotide-binding region |
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| Protein accession | YP_732770 |
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| Protein GI | 113968977 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0100143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA GTAAACGTCG TTTTATCAAA GGCGCAGCTG TGACGGGTGG CGTGGGATTA
TTTGCCGCAG GTTACAGCCA TACCTTAGCG CAAATGGGCA AAGGGGTCGT GAATGGCAGT
TCAGGCAAAA CCACCCAAGA TCCCATCCAT GGCAATTCGC TAGCCCCTGA ATATAAAGTG
GATTTAACCT CAGGCCAGCT GATTGGCAAC GATGAACAAC GCATCGCCAA TACCATGTGT
CTCGGCTGCT GGACCAAGTG TGGCGTGCGC GCCCGTATCG ATAATAAAAC AGATAAGATC
CTCCGCATCA GCGGTAATCC CTATCATCCA CTCTCGGCGC GGGAACATAT CGACTTCGAT
ACCCCGATCA AAACCGCCTT AGTCGGTTTA AGCGCCTATC AGGAGCAGGG CTTACAGGGG
CGCTCTACCG CCTGCGCCCG TGGCAATGCC ATGTTAGAAC AACTAGATAG TCCCTATCGC
GTCACCCAAT GCCTTAAACG GGTCGGGCCA CGCGGCAGTG GTCAATGGCA AAGCATTAGT
TTCGAGCAAC TGCTGACCGA GGTCGTCGAT GGCGGTGACT TATTTGGCGA AGGCCATGTC
GAAGGCTTAA GAGCGATTCG CGATATCAGC ACGCCACTCG ATGCCAATAA TCCTGAATAT
GGCCCCAAGG CCAACCAATT ATTGGTGTCG AACGCTTCGG ATGAGGGCCG CGATGTCATC
ATTAAACGCT TTACCTTCAA TAGTTTCGGT ACACGAAATT TTGCCAACCA CGGCGCCTAT
TGCGGCTTTA CCTATCGCGC AGGTGCAGGT GCCCTGCTCG ACGATTTAAA AAAGTACGCT
CACCTTAAGC CCGATTGGGA CAATAGCGAG TTTCTGCTGT TTATCGGCAC CTCGCCGCAA
CAGTCGGGCA ATCCTTTTAA ACGCCAAGCA CGGCAGTTGG CCAACGCTCG GGTCGATGGG
CGAGAATTCA GTTATGTGGT GGTGTCGCCC ATGTTGCCCA ACACCTCGAA CCAGCCCTGC
GCGGGCAACA ATACTTGGCT GCCCATTCGC CCCGCAACCG ACTCCGCCCT CGCCATGGGC
ATGTTGCGCT GGATTATCGA TAACCAGCGC TACGCCAGTG CGTTTTTAAC CGCGCCCAAT
GCCGAGGCGG CGAAAGCAGC AGGCTACCGA GGCTTTAGTA ATGCCAGCTT CTTAATCATC
AGCACGCCAA ATCACCCCAG ATACGGCCAA TATTTGTATG CCAGTGATCT CGGCTTGCCC
TTCGAAGGTA AAGCTTACGG CGAGCAGGAT TCACCACTGG TTGTCGAGGC CGCTACTGGG
CAGATCCTAC CTGCCGGACA ATGCGCCAAG GCGCAACTTG AGGTTGAGCA AAGCGTGAAT
ACGCCAAAGG GCGAGCTGAG CGTGAAATCG AGTTTTCAGC TGCTCAGTGA AGCCGCGCGC
AGCGTCGAGA TGGCCGACTA CGCCAAGGAA TGCGATATCA GCGAGGCGCA AATTGCCGCC
CTCGCCCACA AATTCACAGA TCACGGCACT AAGGCGGCGG TGATTTCCCA CGGCGGTACC
ATGAGTGCTA ACGGTTTTTA CAGTGCATGG GCGATCATGA TGCTCAACGC CATGATTGGT
AACCTAAATC TTAAGGGCGG CGCTATGGCT AAGGGCGGCA CCTTCCCCGC CTTTGGTGCT
GGCCCAAGGT ACAATTTGCA GGACTTTGAC GGCATGGTCG AACCTAAGGG CGTATTCCTT
TCCCGCTCTA AGTTCCCCTA CGAAAAAACC TCTGAGTACC GCCGTAAAAT CGAAGCGGGA
GAGTCGCCCT ATCCGTCGAA GGAGCCTTGG TTCCCCATAT CATCGCCCCT GCTGGGCGAA
CATTTAACCG CGGCGGTGCA CGGTTATCCC TATCGACTCA AGGCGTGGAT CAACCATATG
GGCAACCCCA TTTATGGCCA GGCGGGTCTC GGCGAAGCCA TTGGTGAACA ATTAAAAGAT
CCCAAAGTAT TATCGCTATT TATCAGCATC GACAGCTTTA TCAATGAGAC CTCGGCGCTG
TCGGACTACA TAGTGCCCGA CACCTTAACC TATGAATCTT GGGGCTGGAG CGCCGCGTGG
CACGGTACGC TCACCAAAGA AGCCACCGGG CGCTGGCCGA TTGTCGAGCC GAGGGTCGCC
AAAACTGCCG ACGGCGATGT GATTTGTATG GAGTCCTTCC TTAGCCAAGT GGCGATAAAA
CTTAATCTGC CCGGCTTTGG CGCCAATGCT ATCAAGGCCG CAGATGGCAG TTTGCATCCT
TTGAGCCGCG CGGCCGATTT CTCGCTCTAC GGCGCGGCGA ACGTGGCTTA CCTTGGTAAA
CCCGTTGCCG ATATCAATGC CGAAGATATG TACTTCAGTG GTGTTGGGCG CATTCAAGCG
GAACTCAATG CCAGACTCAA ACCCGAAGAG GTCAAAAAAG TCAGTTACTT ATTTGCCCGT
GGCGGCCGCT TTGAGAATAT CAGCGCGGGT CGCGACGAGG CGGGCAACCC CAGCAAGGTT
TGGCCAAAAC CTTTAATGCT GTGGAACCCA GAAGTCGGCA GTCGGCGCAA CAGCTTGAGC
GGTGAATATA TGAGTGGCTG TCCACGGCGT TATCACCCTG CGCTCGCCAA CGGCACACCC
TTGGAGCAAG CATTCGATAA GTCACAGTGG CCGCTGCTGA TCAGCAGTTA TAAGTCGCAT
ACTATGAGTT CGATGAGCAT AGGTTCGGAC CGTTTGCGCC AAGTGCACCC CAACAATCCG
GTGCGCATCA ATGAACAAAC CGCGGCACGT TTTGGCATCA AGACCGGAGA TACGGTCAAG
ATCAGCACGC CAAATGGCAG TGTGGTGGCC TTGGTGGAAT GTGTGGCGGG CGTGCATCCC
GACTGCATTG CCATCGAACA CGGTTATGGC CATAAGGAGT TAGGCGCGCG GGATATCGTC
ATCGATGATA AAAAGATTGC CGCCAATCCG CTGATCCGCG TCGGAGTCAA TATGAACGAC
TTGAATCTGT TCGACCCAAG CCGCCATGGG CGCTATCCGC TGGTGGACTG GGCCAGCGGT
GCATCGGCGC GGCAAGGACT TCCCGCCAAG ATAGAGAAAA TCGCTTAA
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| Protein sequence | MDKSKRRFIK GAAVTGGVGL FAAGYSHTLA QMGKGVVNGS SGKTTQDPIH GNSLAPEYKV
DLTSGQLIGN DEQRIANTMC LGCWTKCGVR ARIDNKTDKI LRISGNPYHP LSAREHIDFD
TPIKTALVGL SAYQEQGLQG RSTACARGNA MLEQLDSPYR VTQCLKRVGP RGSGQWQSIS
FEQLLTEVVD GGDLFGEGHV EGLRAIRDIS TPLDANNPEY GPKANQLLVS NASDEGRDVI
IKRFTFNSFG TRNFANHGAY CGFTYRAGAG ALLDDLKKYA HLKPDWDNSE FLLFIGTSPQ
QSGNPFKRQA RQLANARVDG REFSYVVVSP MLPNTSNQPC AGNNTWLPIR PATDSALAMG
MLRWIIDNQR YASAFLTAPN AEAAKAAGYR GFSNASFLII STPNHPRYGQ YLYASDLGLP
FEGKAYGEQD SPLVVEAATG QILPAGQCAK AQLEVEQSVN TPKGELSVKS SFQLLSEAAR
SVEMADYAKE CDISEAQIAA LAHKFTDHGT KAAVISHGGT MSANGFYSAW AIMMLNAMIG
NLNLKGGAMA KGGTFPAFGA GPRYNLQDFD GMVEPKGVFL SRSKFPYEKT SEYRRKIEAG
ESPYPSKEPW FPISSPLLGE HLTAAVHGYP YRLKAWINHM GNPIYGQAGL GEAIGEQLKD
PKVLSLFISI DSFINETSAL SDYIVPDTLT YESWGWSAAW HGTLTKEATG RWPIVEPRVA
KTADGDVICM ESFLSQVAIK LNLPGFGANA IKAADGSLHP LSRAADFSLY GAANVAYLGK
PVADINAEDM YFSGVGRIQA ELNARLKPEE VKKVSYLFAR GGRFENISAG RDEAGNPSKV
WPKPLMLWNP EVGSRRNSLS GEYMSGCPRR YHPALANGTP LEQAFDKSQW PLLISSYKSH
TMSSMSIGSD RLRQVHPNNP VRINEQTAAR FGIKTGDTVK ISTPNGSVVA LVECVAGVHP
DCIAIEHGYG HKELGARDIV IDDKKIAANP LIRVGVNMND LNLFDPSRHG RYPLVDWASG
ASARQGLPAK IEKIA
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