| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0579 |
|---|
| Symbol | |
|---|
| ID | 4251142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 668908 |
|---|
| End bp | 670716 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638117138 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_732716 |
|---|
| Protein GI | 113968923 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAACCAC CCCAATTACA ACATTTTTAC ATTTCCGAAG AGCAATCCAT TTACTTGCTC
AAAGCCAACG ATGCCCGTAA ACACAAGGCG TGGATCCGTT TATGTAAACA ACAGTTAAGT
AAGTTGGGTT ATCGCGACAT TGAGTTTATC GGTAAGGGGG CTTACGGCTT TGTGTTTGCG
GGAATTAATC AGGCCGACGA AGCCCATGTA TTTAAATTCT CAAGAATTAA TCTGCCGCAG
CATATTCAAG ATCGCTTAGA GGAAGAAGCC TTTATGCTGT CCCTACTCAA ACACCCCAAT
ATTCCGGGGG CGATCAAATT TGAGCGCGTC GGTAAACAAG GGATCTTAGT GATGGAGCGC
GCTAAGGGCG AAGATCTCGA GCAGCTTTGC CGCCGCTTAG GCGCCCTCCC TCCCGCCATG
GTGATGAGTA TTGCCCGCCA ACTGGCCGAT ATTCTCTACT ATCTGCGAAC GGGCAAACCC
TTAGTGCATG GCGACATTAA GCCTTCAAAC CTTGTCTATG ATATTGAAAG CCAACATTTA
TCCTTAATCG ACTGGGGCTC GGCCGTATTT GCGCAACGGG ATGAACATAA CAAGGCCGTC
GAAGACAATG TGATGACGCT GATGTCGAGC GATCAACAGC ACACTAACGC CCGCATGGGG
GACGTGTATT TTATCGGTGA AGAGCAGCTA AATGGCGCGC TCTCTAGCCC GCGTTTCGAC
GAGCAAGGCG TAGCAGCGAC CTTGTATGCC TTGGCCTCAG GACAGGCAAG TCGCTTCGGC
GCACAGGTGA TCCCGCCCAC CAGCATAGGC TTACCCATGG AGTTGGCGCG CACCTTGGAA
GGCATGCTTA GTAGTGATGC CGTGCAGCGC AATCTGGCGG GTGATTATTT TCTCAAAAGC
ATGCGCCACA GCCATAGAAT ACACTTACCC GAGCTGCCCA AAACCGAACT GCTGGGTGAA
ATCCCCGTCT GGGTGCAATC CCGCGAGAAA GATGTCGAAA CCGTCAGTTA CAGCTCGCGC
AAATCCTTTT TAAAGGAACA TAACGCGCAG GAACCCATCG CTAAGATGGA TGACATTCAG
CTCGAAAAAT ACTATCGCAA CTTCTTAGCC GGCATGGGCG ATACCGAAAA GGGCTTTATT
GCCGCCGTGG GGCGACTCGG TCAATATCCC ATAGTGGGCG GCCTTGCTAT CCATTGGCAA
GAAACTGGCG TGTTTATCGA CTCCAACCTG GCCATCTACG ATGCTAAACA AAAGAGTGCG
CTCATCATCG CCGTCAATAA TATGGTGACA CTCGCGCGGG GGATTAAGCG TATCGGGGTG
TTTAAGGCCT GCTTCTTTAA TGCTAGGGAC ACGCTACATA TCGAGCGCGA AAACACCAGC
GAACCCTTTA TCGCCAGCGC CGATCTCCAA CTGCCCTTCG AAGTCGGAGA TGTGCCGACC
CTCGAAGATA AATCGCGGCT TCACTCTTAC TTTGAAGACG GTAAGGATCC AGATGAGAAC
CTCGAATTAC CGAGTGAAAT CATGGAGGAA TTGGCGCGTA TCAACCAAAT CCACCACACT
GGCTGCATTA TTTTTGAAGC GCTGCCGAAT CACTTAAAGA TCCACAGTTA CTTAAAACTG
CTCAATCCGC GTAAACAGGC GGCATTTCGC GCTAGCCTCG ACCGCATTTT GCATTATGTC
GGTAAAATTC AAGGTCATGG GGTATCGGGC TTTATGAAAC TGCCCTATAA AAATACTCGC
CGCTTTACCC ATATTGAGCG AAAAGCTGAG CATTTTTATC CTAGAAACCC AAAAGAAATA
GGCGCATAA
|
|---|
| Protein sequence | MQPPQLQHFY ISEEQSIYLL KANDARKHKA WIRLCKQQLS KLGYRDIEFI GKGAYGFVFA
GINQADEAHV FKFSRINLPQ HIQDRLEEEA FMLSLLKHPN IPGAIKFERV GKQGILVMER
AKGEDLEQLC RRLGALPPAM VMSIARQLAD ILYYLRTGKP LVHGDIKPSN LVYDIESQHL
SLIDWGSAVF AQRDEHNKAV EDNVMTLMSS DQQHTNARMG DVYFIGEEQL NGALSSPRFD
EQGVAATLYA LASGQASRFG AQVIPPTSIG LPMELARTLE GMLSSDAVQR NLAGDYFLKS
MRHSHRIHLP ELPKTELLGE IPVWVQSREK DVETVSYSSR KSFLKEHNAQ EPIAKMDDIQ
LEKYYRNFLA GMGDTEKGFI AAVGRLGQYP IVGGLAIHWQ ETGVFIDSNL AIYDAKQKSA
LIIAVNNMVT LARGIKRIGV FKACFFNARD TLHIERENTS EPFIASADLQ LPFEVGDVPT
LEDKSRLHSY FEDGKDPDEN LELPSEIMEE LARINQIHHT GCIIFEALPN HLKIHSYLKL
LNPRKQAAFR ASLDRILHYV GKIQGHGVSG FMKLPYKNTR RFTHIERKAE HFYPRNPKEI
GA
|
|---|
| |